BLASTX nr result

ID: Atractylodes22_contig00043587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043587
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]         108   6e-22
gb|ABM55238.1| integrase [Beta vulgaris]                               94   1e-17
gb|ABH08430.1| putative integrase [Beta vulgaris]                      94   1e-17
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...    86   3e-15
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...    84   9e-15

>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/90 (61%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
 Frame = -1

Query: 290 DNVLYGLK*APRA*YDTHSLFMLENGFTRVTIDKTLFIKKHKCHVILIQI--DDIFFGSI 117
           D  LYGLK APRA YDT S F+LENGF+R  ID TLF++KHK +VIL+QI  DDI FG+ 
Sbjct: 36  DKALYGLKQAPRAWYDTLSTFLLENGFSRGKIDNTLFLRKHKGNVILVQIYVDDIIFGAT 95

Query: 116 DENLCKRFSILVQGTYDMSMM*RLTFFLGL 27
            E++C++FS L+Q  Y+ S+M  LTFFLGL
Sbjct: 96  KESMCRKFSKLMQSKYETSLMGELTFFLGL 125


>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
 Frame = -1

Query: 290  DNVLYGLK*APRA*YDTHSLFMLENGFTRVTIDKTLFIKKHKCHVILIQI--DDIFFGSI 117
            D  LYGLK APR+ Y+  S F+LEN F R  +DKTLF+K     ++L+QI  DDI FG+ 
Sbjct: 1153 DKALYGLKQAPRSWYERLSKFLLENNFKRGKVDKTLFLKSKGTDILLVQIYVDDIIFGAT 1212

Query: 116  DENLCKRFSILVQGTYDMSMM*RLTFFLGL 27
            +E LCK FS LV   ++MSMM  L FFLGL
Sbjct: 1213 NETLCKEFSRLVSNEFEMSMMGELNFFLGL 1242


>gb|ABH08430.1| putative integrase [Beta vulgaris]
          Length = 1516

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
 Frame = -1

Query: 290  DNVLYGLK*APRA*YDTHSLFMLENGFTRVTIDKTLFIKKHKCHVILIQI--DDIFFGSI 117
            D  LYGLK APR+ Y+  S F+LEN F R  +DKTLF+K     ++L+QI  DDI FG+ 
Sbjct: 1153 DKALYGLKQAPRSWYERLSKFLLENNFKRGKVDKTLFLKSKGTDILLVQIYVDDIIFGAT 1212

Query: 116  DENLCKRFSILVQGTYDMSMM*RLTFFLGL 27
            +E LCK FS LV   ++MSMM  L FFLGL
Sbjct: 1213 NETLCKEFSRLVSNEFEMSMMGELNFFLGL 1242


>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
 Frame = -1

Query: 392  VWNSFLRGWMIIYQSFFVNEPXXXXXXXXXXXXL--DNVLYGLK*APRA*YDTHSLFMLE 219
            V ++FL G+++  +  +V +P               +  LYGLK APRA YD  S F+LE
Sbjct: 1750 VKSAFLNGYIV--EEVYVEQPPGFESFDLPNHVYKLEKALYGLKQAPRAWYDRLSKFLLE 1807

Query: 218  NGFTRVTIDKTLFIKKHKCHVILIQI--DDIFFGSIDENLCKRFSILVQGTYDMSMM*RL 45
            N F    ID TLFIK     ++++QI  DDI FGS + +LC+ FS  +   ++MSMM  L
Sbjct: 1808 NDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGEL 1867

Query: 44   TFFLGL 27
            +FFLGL
Sbjct: 1868 SFFLGL 1873


>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
 Frame = -1

Query: 281  LYGLK*APRA*YDTHSLFMLENGFTRVTIDKTLFIKKHKCHVILIQI--DDIFFGSIDEN 108
            LYGLK APRA YD  S F+++N F R  +D TLF +  K  ++++QI  DDI FGS + +
Sbjct: 1354 LYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNAS 1413

Query: 107  LCKRFSILVQGTYDMSMM*RLTFFLGL 27
            LCK FS L+Q  ++MSMM  L FFLG+
Sbjct: 1414 LCKEFSKLMQDEFEMSMMGELKFFLGI 1440


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