BLASTX nr result

ID: Atractylodes22_contig00043584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043584
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   117   1e-24
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   106   2e-21
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   104   7e-21
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   103   1e-20
ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213...    99   5e-19

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/105 (53%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
 Frame = +3

Query: 18  RGEDRPHDH---GSFWSIKGRRLELPTFDGSDPDGWLLRAERYCALNRLTNAERMEVAAI 188
           RGE     H   G  W  + ++L++P FD +DPDGW+LR ER+ A   LT+AE+ME A +
Sbjct: 157 RGEAWSRGHSGPGGNW--RHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVV 214

Query: 189 AFEGDALRWYQWENKRREIISWEELKRLLLAQFRPTSEGSLCEQF 323
           A EGDALRWYQWENKRR   +WE +K  +L QFRP + GSL EQ+
Sbjct: 215 AMEGDALRWYQWENKRRPFRNWESMKSFVLTQFRPLNVGSLHEQW 259


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/85 (56%), Positives = 60/85 (70%)
 Frame = +3

Query: 69   RRLELPTFDGSDPDGWLLRAERYCALNRLTNAERMEVAAIAFEGDALRWYQWENKRREII 248
            RR+E+P F G +PDGW+ RA+RY A   LT  E++  AA++ +GDAL WYQW + R    
Sbjct: 771  RRVEMPVFTGENPDGWIFRADRYFATYGLTEEEKLVAAAMSLDGDALSWYQWTDSREVFG 830

Query: 249  SWEELKRLLLAQFRPTSEGSLCEQF 323
            SWE LKR LL +FR T EGSLCEQF
Sbjct: 831  SWENLKRRLLLRFRLTQEGSLCEQF 855


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  104 bits (260), Expect = 7e-21
 Identities = 48/111 (43%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
 Frame = +3

Query: 3   EDRRERGEDRPHDHGSFW----SIKGRRLELPTFDGSDPDGWLLRAERYCALNRLTNAER 170
           ++RRE  +      G  +    S + ++L+LP F G++PDGW++RAER+    RLT  E+
Sbjct: 74  DERRENDDGEGEGFGGGFRGGGSWRAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEK 133

Query: 171 MEVAAIAFEGDALRWYQWENKRREIISWEELKRLLLAQFRPTSEGSLCEQF 323
           +E A ++ +G+AL WYQWEN+RR I  W E++ +LL +FR T+ GSL EQ+
Sbjct: 134 VEAAVVSLDGEALLWYQWENRRRPIHRWSEMRWMLLRRFRETALGSLQEQW 184


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/93 (50%), Positives = 64/93 (68%)
 Frame = +3

Query: 45  GSFWSIKGRRLELPTFDGSDPDGWLLRAERYCALNRLTNAERMEVAAIAFEGDALRWYQW 224
           G  W  K +RL+LP F G++PDGW+LR ERY    RL   E++E A +A +G+AL W+QW
Sbjct: 74  GGGW--KAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEALLWFQW 131

Query: 225 ENKRREIISWEELKRLLLAQFRPTSEGSLCEQF 323
           E++ R I  W E+K +LL QFR T+ GSL EQ+
Sbjct: 132 EHRHRPITGWPEMKAMLLRQFRDTALGSLQEQW 164


>ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
           sativus]
          Length = 764

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/107 (41%), Positives = 70/107 (65%)
 Frame = +3

Query: 3   EDRRERGEDRPHDHGSFWSIKGRRLELPTFDGSDPDGWLLRAERYCALNRLTNAERMEVA 182
           ++RR   E+  ++   F     +++E+P F+G DPD WL RA+RY  +++L++AE++ VA
Sbjct: 95  KERRTEDEEGANERDKF-----KKVEMPVFNGEDPDSWLFRADRYFQIHKLSDAEKVLVA 149

Query: 183 AIAFEGDALRWYQWENKRREIISWEELKRLLLAQFRPTSEGSLCEQF 323
            I+FEG AL WY+ + +R +   W  LK  LL +FR + EGS+C QF
Sbjct: 150 TISFEGPALNWYRAQEERDKFTGWHNLKERLLVRFRSSREGSICGQF 196


Top