BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043556
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subc...   176   2e-42
gb|ABF96216.1| retrotransposon protein, putative, Ty1-copia subc...   173   1e-41
gb|AAP46197.1| putative gag-pol polyprotein [Oryza sativa Japoni...   173   1e-41
gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sa...   172   2e-41
emb|CAN81845.1| hypothetical protein VITISV_037891 [Vitis vinifera]   168   5e-40

>gb|ABA95205.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1407

 Score =  176 bits (446), Expect = 2e-42
 Identities = 83/105 (79%), Positives = 92/105 (87%)
 Frame = -2

Query: 316  FTQKEGIDYQETFSPVSRKDSLRIVMALVAHYDLELHQMDVKTAFLNGDLQEDVYMRQPE 137
            FTQ+EGIDY ETFSPVS KDS RI+MALVAHYDLELHQMDVKTAFLNGDL EDVYM QPE
Sbjct: 954  FTQREGIDYNETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDLYEDVYMAQPE 1013

Query: 136  GFIPKGKEHMVCKLKNSIYGLKQASRQWYLKFDEVVKGQDFLKNQ 2
            GF+ KGKEHM C LK SIYGLKQASRQWYLKFD++++   F +N+
Sbjct: 1014 GFVMKGKEHMGCYLKKSIYGLKQASRQWYLKFDQIIRQFGFKENK 1058


>gb|ABF96216.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 904

 Score =  173 bits (439), Expect = 1e-41
 Identities = 80/105 (76%), Positives = 93/105 (88%)
 Frame = -2

Query: 316 FTQKEGIDYQETFSPVSRKDSLRIVMALVAHYDLELHQMDVKTAFLNGDLQEDVYMRQPE 137
           F+Q+EGIDY ETFSPVS+KDS RIVMALVAHYDLELHQMDVKTAFLNG+L EDVYM +PE
Sbjct: 455 FSQREGIDYNETFSPVSKKDSFRIVMALVAHYDLELHQMDVKTAFLNGELHEDVYMAEPE 514

Query: 136 GFIPKGKEHMVCKLKNSIYGLKQASRQWYLKFDEVVKGQDFLKNQ 2
           GF+ +GK+H+ CKLK SIY LKQASRQWYLKFDE++K   F +N+
Sbjct: 515 GFVMEGKDHLACKLKKSIYELKQASRQWYLKFDEIIKRFGFKENE 559


>gb|AAP46197.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 890

 Score =  173 bits (439), Expect = 1e-41
 Identities = 80/105 (76%), Positives = 93/105 (88%)
 Frame = -2

Query: 316 FTQKEGIDYQETFSPVSRKDSLRIVMALVAHYDLELHQMDVKTAFLNGDLQEDVYMRQPE 137
           F+Q+EGIDY ETFSPVS+KDS RIVMALVAHYDLELHQMDVKTAFLNG+L EDVYM +PE
Sbjct: 441 FSQREGIDYNETFSPVSKKDSFRIVMALVAHYDLELHQMDVKTAFLNGELHEDVYMAEPE 500

Query: 136 GFIPKGKEHMVCKLKNSIYGLKQASRQWYLKFDEVVKGQDFLKNQ 2
           GF+ +GK+H+ CKLK SIY LKQASRQWYLKFDE++K   F +N+
Sbjct: 501 GFVMEGKDHLACKLKKSIYELKQASRQWYLKFDEIIKRFGFKENE 545


>gb|AAK70633.1|AC091238_11 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|21321753|gb|AAM47288.1|AC122146_7 Putative gag-pol
            polyprotein [Oryza sativa Japonica Group]
            gi|31430568|gb|AAP52462.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1225

 Score =  172 bits (437), Expect = 2e-41
 Identities = 82/105 (78%), Positives = 90/105 (85%)
 Frame = -2

Query: 316  FTQKEGIDYQETFSPVSRKDSLRIVMALVAHYDLELHQMDVKTAFLNGDLQEDVYMRQPE 137
            FTQ+EGIDY ETFSPVS KDS RI+MALVAHYDLELHQMDVKTAFLNGDL EDVYM QPE
Sbjct: 799  FTQREGIDYNETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDLYEDVYMAQPE 858

Query: 136  GFIPKGKEHMVCKLKNSIYGLKQASRQWYLKFDEVVKGQDFLKNQ 2
            GF+ K KEHM C LK SIYGLKQASRQWYLKFD++++   F  N+
Sbjct: 859  GFVMKRKEHMGCHLKKSIYGLKQASRQWYLKFDQIIRQFGFKANK 903


>emb|CAN81845.1| hypothetical protein VITISV_037891 [Vitis vinifera]
          Length = 802

 Score =  168 bits (425), Expect = 5e-40
 Identities = 76/104 (73%), Positives = 90/104 (86%)
 Frame = -2

Query: 316 FTQKEGIDYQETFSPVSRKDSLRIVMALVAHYDLELHQMDVKTAFLNGDLQEDVYMRQPE 137
           FTQKEGIDY++TFSPVS+KDSLRI+M LV H+DLELHQMDVKTAFLNG+L ED+YM QP+
Sbjct: 434 FTQKEGIDYRDTFSPVSKKDSLRIIMTLVXHFDLELHQMDVKTAFLNGNLDEDIYMEQPK 493

Query: 136 GFIPKGKEHMVCKLKNSIYGLKQASRQWYLKFDEVVKGQDFLKN 5
           GF  KG EH+VCKLK SIYGLKQASRQWY+KF+  +   +F +N
Sbjct: 494 GFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFEFKEN 537