BLASTX nr result

ID: Atractylodes22_contig00043522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043522
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus commun...    66   3e-09
ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ...    64   1e-08
emb|CBI18302.3| unnamed protein product [Vitis vinifera]               64   1e-08
emb|CAN68615.1| hypothetical protein VITISV_023389 [Vitis vinifera]    64   1e-08

>ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|222835710|gb|EEE74145.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = -1

Query: 345 LEKGGPVVSEWQRKLLQWQLAYPSGSVEECVDWMTRQMQLKRAR 214
           L+ GGPVV EWQ+KLL WQ A+P+G+VEEC+DWM ++  LKRA+
Sbjct: 484 LKSGGPVVKEWQQKLLAWQFAHPAGTVEECLDWM-KETHLKRAK 526


>ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 577

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = -1

Query: 345 LEKGGPVVSEWQRKLLQWQLAYPSGSVEECVDWMTRQMQLKRAR 214
           L+ GGP+V EWQ+KLL WQLA+P+G+ EEC+DWM ++  LKRAR
Sbjct: 533 LKSGGPLVREWQQKLLAWQLAHPTGTAEECLDWM-KETHLKRAR 575


>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
           vinifera]
          Length = 564

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/42 (64%), Positives = 36/42 (85%)
 Frame = -1

Query: 345 LEKGGPVVSEWQRKLLQWQLAYPSGSVEECVDWMTRQMQLKR 220
           L+ GGP+V +WQ+KL+QWQLA+PSG+ EEC+DWM RQ + KR
Sbjct: 523 LKSGGPLVRDWQQKLIQWQLAHPSGTAEECLDWM-RQKRPKR 563


>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/42 (64%), Positives = 36/42 (85%)
 Frame = -1

Query: 345 LEKGGPVVSEWQRKLLQWQLAYPSGSVEECVDWMTRQMQLKR 220
           L+ GGP+V +WQ+KL+QWQLA+PSG+ EEC+DWM RQ + KR
Sbjct: 478 LKSGGPLVRDWQQKLIQWQLAHPSGTAEECLDWM-RQKRPKR 518


>emb|CAN68615.1| hypothetical protein VITISV_023389 [Vitis vinifera]
          Length = 240

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/42 (64%), Positives = 36/42 (85%)
 Frame = -1

Query: 345 LEKGGPVVSEWQRKLLQWQLAYPSGSVEECVDWMTRQMQLKR 220
           L+ GGP+V +WQ+KL+QWQLA+PSG+ EEC+DWM RQ + KR
Sbjct: 199 LKSGGPLVRDWQQKLIQWQLAHPSGTAEECLDWM-RQKRPKR 239


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