BLASTX nr result

ID: Atractylodes22_contig00043509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043509
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305039.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-27
ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containi...    85   2e-26
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...    83   3e-26
ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-23
ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-23

>ref|XP_002305039.1| predicted protein [Populus trichocarpa] gi|222848003|gb|EEE85550.1|
           predicted protein [Populus trichocarpa]
          Length = 800

 Score = 82.0 bits (201), Expect(2) = 1e-27
 Identities = 38/69 (55%), Positives = 54/69 (78%)
 Frame = -3

Query: 374 FVKELKPEDAEGVLLDMKNAEVVLDAHCYCAIIQGYCQNWNILKALALHDEMESRGIKSN 195
           F  E+K + AE VL DM+  E++ DA CY  +I+GYC+  ++ KALALH++MES+GIK+N
Sbjct: 314 FCNEMKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKTN 373

Query: 194 CVIVSSIMQ 168
           CVIVS+I+Q
Sbjct: 374 CVIVSTILQ 382



 Score = 65.9 bits (159), Expect(2) = 1e-27
 Identities = 30/54 (55%), Positives = 41/54 (75%)
 Frame = -2

Query: 162 GMLAEAVYRFMDFMESGVFLDKVSFNIAIDALCKLEKMDEAMVLLQEMKSKKMD 1
           GM ++ V  F  F +  +FLD+VS+NI +DALCKLEK+D+A+ LL EMK K+MD
Sbjct: 388 GMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMD 441


>ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score = 85.1 bits (209), Expect(2) = 2e-26
 Identities = 38/71 (53%), Positives = 54/71 (76%)
 Frame = -3

Query: 374 FVKELKPEDAEGVLLDMKNAEVVLDAHCYCAIIQGYCQNWNILKALALHDEMESRGIKSN 195
           F  E+K ++A+GV  DM+   VV D + Y ++I GYC++ N+L+ALALHDEM SRG+K+N
Sbjct: 310 FCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTN 369

Query: 194 CVIVSSIMQCL 162
           CV+VS I+ CL
Sbjct: 370 CVVVSCILHCL 380



 Score = 59.3 bits (142), Expect(2) = 2e-26
 Identities = 26/54 (48%), Positives = 41/54 (75%)
 Frame = -2

Query: 165 LGMLAEAVYRFMDFMESGVFLDKVSFNIAIDALCKLEKMDEAMVLLQEMKSKKM 4
           +GM  E V +F +  ESG+FLD V++NI  DALC L K+++A+ +++EMKSK++
Sbjct: 383 MGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRL 436


>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score = 82.8 bits (203), Expect(2) = 3e-26
 Identities = 38/72 (52%), Positives = 53/72 (73%)
 Frame = -3

Query: 374 FVKELKPEDAEGVLLDMKNAEVVLDAHCYCAIIQGYCQNWNILKALALHDEMESRGIKSN 195
           F  E+K ++AE +L +M+      D + YCA+I GYC   N+LKALALHDEM S+G+K+N
Sbjct: 299 FCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTN 358

Query: 194 CVIVSSIMQCLA 159
           CVI+SSI+Q L+
Sbjct: 359 CVILSSILQGLS 370



 Score = 60.8 bits (146), Expect(2) = 3e-26
 Identities = 26/56 (46%), Positives = 40/56 (71%)
 Frame = -2

Query: 171 AMLGMLAEAVYRFMDFMESGVFLDKVSFNIAIDALCKLEKMDEAMVLLQEMKSKKM 4
           + +GM +E   +F +F + G+F D+  +N+ +DALCKL K++EA+ LL EMK KKM
Sbjct: 370 SQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKM 425


>ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Cucumis sativus]
          Length = 920

 Score = 80.9 bits (198), Expect(2) = 1e-23
 Identities = 40/70 (57%), Positives = 50/70 (71%)
 Frame = -3

Query: 374 FVKELKPEDAEGVLLDMKNAEVVLDAHCYCAIIQGYCQNWNILKALALHDEMESRGIKSN 195
           F  E+K ++AE V LDM+N  VV DA  Y  +I GYC+  N+ KAL+LH  M S+GIKSN
Sbjct: 296 FCDEMKIDEAESVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSLHSLMLSKGIKSN 355

Query: 194 CVIVSSIMQC 165
           CVIVS I+QC
Sbjct: 356 CVIVSFILQC 365



 Score = 53.5 bits (127), Expect(2) = 1e-23
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = -2

Query: 174 YAMLGMLAEAVYRFMDFMESGVFLDKVSFNIAIDALCKLEKMDEAMVLLQEMKSKKM 4
           +  + M +E V +F  F   GVFLD V +NI + ALC+L K++EA+ LL+EM S+++
Sbjct: 366 FLRMQMYSEVVNQFKVFQGKGVFLDNVVYNIVVHALCELGKLEEAIELLEEMTSRQI 422


>ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Cucumis sativus]
          Length = 795

 Score = 80.9 bits (198), Expect(2) = 1e-23
 Identities = 40/70 (57%), Positives = 50/70 (71%)
 Frame = -3

Query: 374 FVKELKPEDAEGVLLDMKNAEVVLDAHCYCAIIQGYCQNWNILKALALHDEMESRGIKSN 195
           F  E+K ++AE V LDM+N  VV DA  Y  +I GYC+  N+ KAL+LH  M S+GIKSN
Sbjct: 296 FCDEMKIDEAESVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSLHSLMLSKGIKSN 355

Query: 194 CVIVSSIMQC 165
           CVIVS I+QC
Sbjct: 356 CVIVSFILQC 365



 Score = 53.5 bits (127), Expect(2) = 1e-23
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = -2

Query: 174 YAMLGMLAEAVYRFMDFMESGVFLDKVSFNIAIDALCKLEKMDEAMVLLQEMKSKKM 4
           +  + M +E V +F  F   GVFLD V +NI + ALC+L K++EA+ LL+EM S+++
Sbjct: 366 FLRMQMYSEVVNQFKVFQGKGVFLDNVVYNIVVHALCELGKLEEAIELLEEMTSRQI 422


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