BLASTX nr result

ID: Atractylodes22_contig00043493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043493
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    94   9e-18
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    87   2e-15
emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]    81   8e-14
emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]    77   1e-12
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    76   2e-12

>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 64/159 (40%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
 Frame = -3

Query: 444  EIRAEVRLLAPVGLNRAMDMATMVEEKN---RALRRGKGLKPFYPVKRVTEG------TT 292
            EIRAE RLL P GL   M+MA  VE++N   RA R   G K    +     G        
Sbjct: 897  EIRAEQRLLQPYGLGHLMEMAQRVEDRNLAMRAAREPNGPKSTKMLSTANRGEWKIGENF 956

Query: 291  DDEXXXXXXXXXXXXXXSEFRRLTDKELQARRQQGLCYRCDEKYGPGHRCKKELSVLVLP 112
                                +RLT+ ELQARR++GL ++C+EK+ PGHRCKKEL VL++ 
Sbjct: 957  QTRAVAVGEKTMSQRREIPIKRLTESELQARREKGLWFKCEEKFSPGHRCKKELRVLLVH 1016

Query: 111  ENEGGEASEQSEDDA--ELGSGNREEAVGVSLNSVVGFS 1
            E+E  E   Q +D A  E      ++AV +SLNSVVG +
Sbjct: 1017 EDE-EEDDNQFDDRATEEPALIELKDAVELSLNSVVGLT 1054


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 30/178 (16%)
 Frame = -3

Query: 444 EIRAEVRLLAPVGLNRAMDMATMVEEKNRA---------------LRRGKGLKPFYPVKR 310
           E+++E+R+L P  L++AM++A  +EE+NR                  RG    P  P   
Sbjct: 301 ELQSEIRVLNPYNLDQAMELALKLEERNRVNGARRTGPRSGSFSIYNRGPNSNPSLPSVY 360

Query: 309 VTEG--------------TTDDEXXXXXXXXXXXXXXSEFRRLTDKELQARRQQGLCYRC 172
            ++G               +                  E RRLT+KELQ +R +GLC++C
Sbjct: 361 GSQGGSNASTKSWAINSNASQTSVNNAKPPPLSSRGFGEMRRLTEKELQEKRAKGLCFKC 420

Query: 171 DEKYGPGHRC-KKELSVLVLPENEGGEASEQSEDDAELGSGNREEAVGVSLNSVVGFS 1
           DEK+G GH+C +KELSVL + +NE  E            S   E    VSLNSV+G S
Sbjct: 421 DEKWGVGHQCRRKELSVLFMEDNEEDELEGALSGSEAPPSPTEEIPPEVSLNSVIGLS 478


>emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]
          Length = 1258

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
 Frame = -3

Query: 444 EIRAEVRLLAPVGLNRAMDMATMVEEKNRALRRGKGLKPFYPVKRVTEGTTDD------- 286
           EIRA++ LL P GL   M+MA  V+++N  +R  +  K     K ++     D       
Sbjct: 291 EIRAKL-LLQPYGLGHLMEMAQRVKDRNLTMRVAREPKDPKSTKMLSSAIRGDWKIGKNF 349

Query: 285 --EXXXXXXXXXXXXXXSEFRRLTDKELQARRQQGLCYRCDEKYGPGHRCKKELSVLVLP 112
                               +RL + ELQA R++GLC++CDEK+ PGH  KKEL VL++ 
Sbjct: 350 QTRAVAVSEKTISQRREIPIKRLAESELQALREKGLCFKCDEKFSPGHHYKKELRVLLVH 409

Query: 111 ENEGGEASEQSEDDAELGSGNREE--------AVGVSLNSVVGFS 1
           E+E        E+D +   G  EE         V +SLNSVVG +
Sbjct: 410 EDE-------EEEDNQFDGGTTEEPSLIELKDVVELSLNSVVGLT 447


>emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera]
          Length = 1242

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
 Frame = -3

Query: 411 VGLNRAMDMATMVEEKNRALRRGKGLKPFYPVKRVTEGTTDD---------EXXXXXXXX 259
           +GL   M+MA  VE +N  L   +  +     K ++     D                  
Sbjct: 110 IGLGHLMEMAQRVENRNLTLWAAREPRDPKSTKMLSSANQGDWKIGENFQTRAVAIREKM 169

Query: 258 XXXXXXSEFRRLTDKELQARRQQGLCYRCDEKYGPGHRCKKELSVLVLPENEGGEASEQS 79
                    +RLT+ ELQARR++G+C++CDEK+  GHRCKKEL VL++ E+E  E ++  
Sbjct: 170 MNQHREIPIKRLTESELQARREKGICFKCDEKFSLGHRCKKELRVLLVHEDEREEDNQFD 229

Query: 78  E-DDAELGSGNREEAVGVSLNSVVGFS 1
           E    E      ++A+ +SLNSVVG +
Sbjct: 230 ERATMEPSLIELKDAMELSLNSVVGLT 256


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 62/194 (31%), Positives = 85/194 (43%), Gaps = 46/194 (23%)
 Frame = -3

Query: 444 EIRAEVRLLAPVGLNRAMDMATMVEEKNRALRRGK----------------------GLK 331
           EI+ EVR++ P  L+ AM++A  VEEK     + K                        K
Sbjct: 226 EIKNEVRIMGPSSLDHAMELAVQVEEKLNHRPKKKWESKASSYSAHNPNSYIPKPTLSAK 285

Query: 330 PFYPVKRVTE----------------GTTDDEXXXXXXXXXXXXXXSEFRRLTDKELQAR 199
           P Y     T+                 T+ +                E RRL++KELQ +
Sbjct: 286 PTYSFNYPTQTHNTPYNQFPAPSHHSSTSINSPNKPKTTLPIAKPFGEIRRLSEKELQYK 345

Query: 198 RQQGLCYRCDEKYGPGHRC-KKELSVLVLPENEGGEASEQSE-------DDAELGSGNRE 43
           R+ GLC+RCDEK+  GHRC KKELS+L+  E E  E     E       DD++L   + E
Sbjct: 346 REHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQPAHPDDSQLEIHSPE 405

Query: 42  EAVGVSLNSVVGFS 1
               +SLNSV+G S
Sbjct: 406 ----ISLNSVMGIS 415


Top