BLASTX nr result

ID: Atractylodes22_contig00043483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043483
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...    75   7e-12
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    68   7e-10
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...    62   5e-08
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]               62   5e-08
ref|NP_174669.1| uncharacterized protein [Arabidopsis thaliana] ...    59   3e-07

>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/80 (40%), Positives = 44/80 (55%)
 Frame = +3

Query: 156 YTLWHHIFLDICKSAKVLGHITGKSKPTSDDDEDWHSIDSKIKTWLYNTCDANLLQIIVS 335
           Y +W  +F  +C S  VLGHI G S PT   ++ W   D  +K W+Y T   +LL  I+ 
Sbjct: 33  YDVWRELFETLCLSFGVLGHIDGSSTPTPMTEKRWKERDGLVKMWIYGTITDSLLDTIIK 92

Query: 336 KDCTAKDLWDKIDEFFNSNK 395
             CTA+DLW  ++  F  NK
Sbjct: 93  VGCTARDLWLSLENLFRDNK 112


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/80 (35%), Positives = 45/80 (56%)
 Frame = +3

Query: 156 YTLWHHIFLDICKSAKVLGHITGKSKPTSDDDEDWHSIDSKIKTWLYNTCDANLLQIIVS 335
           Y LW  +F   C S  VLGH+ G +K T +  ++W   D  +K W+Y T   +++  ++ 
Sbjct: 32  YNLWRELFETHCVSFGVLGHLDGSTKSTPEIAKEWKERDGHVKMWIYGTISESIIDTVLK 91

Query: 336 KDCTAKDLWDKIDEFFNSNK 395
           K+ TA++LW  I+  F  NK
Sbjct: 92  KNSTARELWLAIETLFLDNK 111


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/87 (34%), Positives = 43/87 (49%)
 Frame = +3

Query: 135 LSNDASKYTLWHHIFLDICKSAKVLGHITGKSKPTSDDDEDWHSIDSKIKTWLYNTCDAN 314
           L  + S Y  W  +FL  C S  VLGHI G  +P +  D +W   D  +K WLY T    
Sbjct: 24  LDIEESNYDAWRELFLTHCLSFDVLGHIDGTLQPANAADVNWQKRDGIVKLWLYGTLTPK 83

Query: 315 LLQIIVSKDCTAKDLWDKIDEFFNSNK 395
             Q       T++++W +I+  F +NK
Sbjct: 84  QFQGSFVFGSTSREIWLRIENQFRNNK 110


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/87 (34%), Positives = 43/87 (49%)
 Frame = +3

Query: 135 LSNDASKYTLWHHIFLDICKSAKVLGHITGKSKPTSDDDEDWHSIDSKIKTWLYNTCDAN 314
           L  + S Y  W  +FL  C S  VLGHI G  +P +  D +W   D  +K WLY T    
Sbjct: 20  LDIEESNYDAWRELFLTHCLSFDVLGHIDGTLQPANAADVNWQKRDGIVKLWLYGTLTPK 79

Query: 315 LLQIIVSKDCTAKDLWDKIDEFFNSNK 395
             Q       T++++W +I+  F +NK
Sbjct: 80  QFQGSFVFGSTSREIWLRIENQFRNNK 106


>ref|NP_174669.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10086469|gb|AAG12529.1|AC015446_10 Hypothetical
           Protein [Arabidopsis thaliana]
           gi|332193548|gb|AEE31669.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 308

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/87 (34%), Positives = 42/87 (48%)
 Frame = +3

Query: 135 LSNDASKYTLWHHIFLDICKSAKVLGHITGKSKPTSDDDEDWHSIDSKIKTWLYNTCDAN 314
           L  + S Y  W  +FL  C S  V+GHI G   PT+ +D +W   D  +K  LY T    
Sbjct: 24  LDIEESNYDAWRELFLTHCLSFDVMGHIDGTLLPTNANDVNWQKRDGIVKLSLYGTLTPK 83

Query: 315 LLQIIVSKDCTAKDLWDKIDEFFNSNK 395
             Q       T++D+W +I   F +NK
Sbjct: 84  QFQGSFVTSSTSRDIWLRIKNQFRNNK 110


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