BLASTX nr result

ID: Atractylodes22_contig00043465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043465
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238343.1| transcription initiation factor IIB [Glycine...   116   2e-24
ref|XP_003519077.1| PREDICTED: transcription initiation factor I...   116   2e-24
ref|XP_003625123.1| Transcription initiation factor IIB [Medicag...   115   5e-24
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   112   4e-23
ref|XP_003553400.1| PREDICTED: transcription initiation factor I...   112   4e-23

>ref|NP_001238343.1| transcription initiation factor IIB [Glycine max]
           gi|1351222|sp|P48513.1|TF2B_SOYBN RecName:
           Full=Transcription initiation factor IIB; AltName:
           Full=General transcription factor TFIIB
           gi|945087|gb|AAB09756.1| transcription factor TFIIB
           [Glycine max]
          Length = 313

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/76 (72%), Positives = 62/76 (81%)
 Frame = -2

Query: 387 SEEFDXXXXXXXXXXXXXXIVTQLSDDKKPLKDVALATGVAEGTIRNSYKDLYPHLTKII 208
           SEEFD              I+TQLSDDKKPLKD++LATGVAEGTIRNSYKDLYPH++KII
Sbjct: 238 SEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKII 297

Query: 207 PNWYAQEEDIKNLCSP 160
           PNWYA+EED+KNLCSP
Sbjct: 298 PNWYAKEEDLKNLCSP 313


>ref|XP_003519077.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
          Length = 314

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/76 (72%), Positives = 62/76 (81%)
 Frame = -2

Query: 387 SEEFDXXXXXXXXXXXXXXIVTQLSDDKKPLKDVALATGVAEGTIRNSYKDLYPHLTKII 208
           SEEFD              I+TQLSDDKKPLKD++LATGVAEGTIRNSYKDLYPH++KII
Sbjct: 239 SEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKII 298

Query: 207 PNWYAQEEDIKNLCSP 160
           PNWYA+EED+KNLCSP
Sbjct: 299 PNWYAKEEDLKNLCSP 314


>ref|XP_003625123.1| Transcription initiation factor IIB [Medicago truncatula]
           gi|355500138|gb|AES81341.1| Transcription initiation
           factor IIB [Medicago truncatula]
          Length = 313

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/76 (71%), Positives = 62/76 (81%)
 Frame = -2

Query: 387 SEEFDXXXXXXXXXXXXXXIVTQLSDDKKPLKDVALATGVAEGTIRNSYKDLYPHLTKII 208
           SEEFD              I+TQLSDDKKPLKD+++ATGVAEGTIRNSYKDLYPH++KII
Sbjct: 238 SEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKII 297

Query: 207 PNWYAQEEDIKNLCSP 160
           PNWYA+EED+KNLCSP
Sbjct: 298 PNWYAKEEDLKNLCSP 313


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
           sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
           transcription initiation factor IIB-2-like [Cucumis
           sativus]
          Length = 312

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/76 (68%), Positives = 61/76 (80%)
 Frame = -2

Query: 387 SEEFDXXXXXXXXXXXXXXIVTQLSDDKKPLKDVALATGVAEGTIRNSYKDLYPHLTKII 208
           SEEFD              I+TQLSDDKKPLKD+++ATGVAEGTIRNSYKDLYPH++KI+
Sbjct: 237 SEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIL 296

Query: 207 PNWYAQEEDIKNLCSP 160
           P WYA+EED+KNLCSP
Sbjct: 297 PGWYAKEEDLKNLCSP 312


>ref|XP_003553400.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
          Length = 296

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/76 (68%), Positives = 62/76 (81%)
 Frame = -2

Query: 387 SEEFDXXXXXXXXXXXXXXIVTQLSDDKKPLKDVALATGVAEGTIRNSYKDLYPHLTKII 208
           SEEFD              I+TQLSDDKKPLKD+++ATGVAEGTIRNSYKDLYPH++KII
Sbjct: 221 SEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKII 280

Query: 207 PNWYAQEEDIKNLCSP 160
           P+WYA+E+D+KNLCSP
Sbjct: 281 PSWYAKEDDLKNLCSP 296


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