BLASTX nr result

ID: Atractylodes22_contig00043390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043390
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271391.2| PREDICTED: protein SPA1-RELATED 2-like, part...    86   2e-15
ref|XP_004143877.1| PREDICTED: protein SPA1-RELATED 2-like [Cucu...    73   2e-11
ref|XP_002509925.1| ubiquitin ligase protein cop1, putative [Ric...    72   5e-11
ref|XP_002304547.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_002271391.2| PREDICTED: protein SPA1-RELATED 2-like, partial [Vitis vinifera]
          Length = 1054

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/116 (42%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
 Frame = +1

Query: 19  MDTEVNAMIDID*ARLQSKEKSFSLKPGSSNKLEFREMAIQGDVNVQESKPNTFTNVLDG 198
           MD EV  +   + + LQ KE  + LKP SS+ L  REM I G+ +  ES P  FT +L+G
Sbjct: 8   MDDEVTTIDVAEGSHLQRKESEYLLKPDSSSMLNSREMVIPGEGDYPESSPQEFTGILEG 67

Query: 199 KNNDQ----VGTSENACSSHC-MDNSGVMVDELTVRNNNG-KLDIVGGSSIREGMQ 348
           KN ++    +  +E+ CS H  +D++G+M++ELT+RN NG  L +VG S+ R+ MQ
Sbjct: 68  KNVNKTVSSLAAAEHTCSGHLPVDDAGIMIEELTLRNYNGANLAVVGPSNNRDRMQ 123


>ref|XP_004143877.1| PREDICTED: protein SPA1-RELATED 2-like [Cucumis sativus]
           gi|449501807|ref|XP_004161464.1| PREDICTED: protein
           SPA1-RELATED 2-like [Cucumis sativus]
          Length = 1036

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/98 (40%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
 Frame = +1

Query: 61  RLQSKEKSFSLKPGSSNKLEFREMAIQGDVNVQESKPNTFTNVLDGKN-----NDQVGTS 225
           R  ++E  + LKP ++N +E +EM    D    +  P+ FT++L+GKN     N+   + 
Sbjct: 24  RQDAQENEYVLKPENNNVVESQEMVTPVDGGYSQYYPHEFTDILEGKNLNRCKNNLKLSD 83

Query: 226 ENACSSHCMDNSGVMVDELTVRNNNG-KLDIVGGSSIR 336
           +  CS HCMD++GVMV+ELTV+N+NG  L I+G S  R
Sbjct: 84  QPECSPHCMDDAGVMVEELTVKNHNGSNLAIIGPSDNR 121


>ref|XP_002509925.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
           gi|223549824|gb|EEF51312.1| ubiquitin ligase protein
           cop1, putative [Ricinus communis]
          Length = 1044

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
 Frame = +1

Query: 7   LNEVMDTEVNAMIDID*ARLQSKEKSFSLKPG-SSNKLEFREMAIQGDVNVQESKPNTFT 183
           ++E +  E+  +   + A L SKE  +S+KP  SSN LE  E+ I G+ +  ES  +   
Sbjct: 1   MDEGLGDEMAPLNMTERAHLHSKENEYSIKPPESSNVLESHEIIIPGEGDYTESSFHVLA 60

Query: 184 NVLDGKNNDQVGTSENACSSHC-----MDNSGVMVDELTVRN-NNGKLDIVGGSSIREGM 345
           ++LD KN ++ G   +A    C     MDN+G MV+ELTVRN ++  L IVG S+ RE +
Sbjct: 61  DILDAKNLNRSGVPMDASEQLCTNPRFMDNAGNMVEELTVRNYDSSNLAIVGTSNFRERI 120

Query: 346 QT 351
           QT
Sbjct: 121 QT 122


>ref|XP_002304547.1| predicted protein [Populus trichocarpa] gi|222841979|gb|EEE79526.1|
           predicted protein [Populus trichocarpa]
          Length = 1020

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
 Frame = +1

Query: 7   LNEVMDTEVNAMIDID*ARLQSKEKSFSLKPG-SSNKLEFREMAIQGDVNVQESKPNTFT 183
           ++E +  EV  M   + A LQ KE  +S+KP  SSN LE RE  I    +  ES  +   
Sbjct: 1   MDEGLGDEVALMDMAEEAHLQGKESEYSVKPPESSNLLESRETVIASAGDYPESSFHVLA 60

Query: 184 NVLDGKNNDQ-----VGTSENACSS-HCMDNSGVMVDELTVRNNNGKLD-IVGGSSIREG 342
           + L+GKN ++     +  S+  CSS   MD++G MV+EL VRN +G    +VG S+ R+ 
Sbjct: 61  DKLEGKNGNRSASPPMDASKQPCSSPRSMDDAGNMVEELMVRNYDGSNSAVVGTSNNRQR 120

Query: 343 MQ 348
           MQ
Sbjct: 121 MQ 122


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