BLASTX nr result

ID: Atractylodes22_contig00043364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043364
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    78   8e-13
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    74   9e-12
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...    72   5e-11
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    65   7e-09
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    64   1e-08

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 34/66 (51%), Positives = 54/66 (81%)
 Frame = +3

Query: 78  QEGTVADYKRRFVAIAAPLEGITEEVFVGQFINGLTPDLRAEVRLLSPVGLNRAMELASM 257
           Q  +V +Y+R+FV  AAPL+GI EE+ +G+FI+GL P+L++E+R+L+P  L++AMELA  
Sbjct: 264 QTASVWEYRRKFVETAAPLDGIPEEILMGKFIHGLNPELQSEIRVLNPYNLDQAMELALK 323

Query: 258 VEEKNK 275
           +EE+N+
Sbjct: 324 LEERNR 329


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/68 (52%), Positives = 47/68 (69%)
 Frame = +3

Query: 78   QEGTVADYKRRFVAIAAPLEGITEEVFVGQFINGLTPDLRAEVRLLSPVGLNRAMELASM 257
            Q+GTVA Y R F  +  PL+GI+EEV    F+NGL P++RAE RLL P GL   ME+A  
Sbjct: 860  QQGTVAAYWREFEILETPLKGISEEVMESTFMNGLLPEIRAEQRLLQPYGLGHLMEMAQR 919

Query: 258  VEEKNKAV 281
            VE++N A+
Sbjct: 920  VEDRNLAM 927


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/68 (48%), Positives = 50/68 (73%)
 Frame = +3

Query: 78  QEGTVADYKRRFVAIAAPLEGITEEVFVGQFINGLTPDLRAEVRLLSPVGLNRAMELASM 257
           Q  TV +++R+F  IAAPL+G+ E+V    F+NGL PD++AE+R  SP GL++ M++A  
Sbjct: 195 QTTTVKEFRRQFEIIAAPLKGLAEDVLEAAFVNGLRPDMQAELRQWSPFGLDKKMQVAQK 254

Query: 258 VEEKNKAV 281
           +EEK KA+
Sbjct: 255 IEEKLKAL 262


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/64 (46%), Positives = 44/64 (68%)
 Frame = +3

Query: 78  QEGTVADYKRRFVAIAAPLEGITEEVFVGQFINGLTPDLRAEVRLLSPVGLNRAMELASM 257
           QE  V +Y+R+F+ + APLEGI E +   QF++ L  +++ EVR++ P  L+ AMELA  
Sbjct: 189 QEEGVVEYRRKFIELLAPLEGIPESIAQAQFVSKLKEEIKNEVRIMGPSSLDHAMELAVQ 248

Query: 258 VEEK 269
           VEEK
Sbjct: 249 VEEK 252


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = +3

Query: 33  RCR-LSTGLTRMAGFCQEGTVADYKRRFVAIAAPLEGITEEVFVGQFINGLTPDLRAEVR 209
           RCR   T   R     QEG+V++Y ++F  ++APL  + EEV  G F NGL P +R EV 
Sbjct: 142 RCRDYGTACARFLAIKQEGSVSEYLQKFEELSAPLPEMAEEVLEGTFTNGLDPRIRKEVF 201

Query: 210 LLSPVGLNRAMELASMVEEK 269
            +  VGL   ME A + EEK
Sbjct: 202 AMRVVGLEDLMEAAQLAEEK 221


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