BLASTX nr result
ID: Atractylodes22_contig00043356
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00043356
(670 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containi... 234 1e-59
ref|XP_002511573.1| pentatricopeptide repeat-containing protein,... 222 6e-56
emb|CAN63945.1| hypothetical protein VITISV_035426 [Vitis vinifera] 180 2e-43
ref|NP_177599.1| pentatricopeptide repeat-containing protein [Ar... 137 1e-30
ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
>ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product
[Vitis vinifera]
Length = 893
Score = 234 bits (597), Expect = 1e-59
Identities = 119/208 (57%), Positives = 141/208 (67%)
Frame = +3
Query: 45 FDPSQFLNESAKSRNFTFEETKIIHTHFLKTNTFHTNPEFSNFLLRSYCKASAFVYALRL 224
FDP F ++ KS T TKI+H HFLKT +N +N L+ YCK+++ V+ALRL
Sbjct: 44 FDPFHFFSDYTKSGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRL 103
Query: 225 FDAIPHPDTSSWNLLITCQNQNLRYGDSWGTFCRMHSLGFIPNEFTYGSALSACIALSFV 404
FD PHP+ SWN+LI+ NQN + DSW FC+M GF PN+FTYGS LSAC AL
Sbjct: 104 FDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSP 163
Query: 405 NCGKLLYSLALKHGFSLDGYVRCGMIDLFLKSSSFNDALRVFYDESCGNVVCWNAIISGA 584
G+L+YSLALK+GF +GYVR GMIDLF K SF DALRVF D C NVVCWNAIISGA
Sbjct: 164 LYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGA 223
Query: 585 VKHDEDDVGLSLFQQMYRGFPSPNKFTF 668
VK+ E+ V L LF QM F PN FTF
Sbjct: 224 VKNRENWVALDLFCQMCCRFFMPNSFTF 251
Score = 88.2 bits (217), Expect = 1e-15
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Frame = +3
Query: 45 FDPSQFLNESAKSRNFTFEET---KIIHTHFLKTNTFHTNPEFSNFLLRSYCKASAFVYA 215
FDP+QF S S +++++ LK N F +N ++ + K +F A
Sbjct: 143 FDPNQFTYGSVLSACTALGSPLYGELVYSLALK-NGFFSNGYVRAGMIDLFAKLCSFEDA 201
Query: 216 LRLFDAIPHPDTSSWNLLITCQNQNLRYGDSWGTFCRMHSLGFIPNEFTYGSALSACIAL 395
LR+F + + WN +I+ +N + FC+M F+PN FT+ S L+AC AL
Sbjct: 202 LRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAAL 261
Query: 396 SFVNCGKLLYSLALKHGFSLDGYVRCGMIDLFLKSSSFNDALRVFYDESCGNVVCWNAII 575
+ G+ + +K G D +V +IDL+ K + A++ F NVV W II
Sbjct: 262 EELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTII 321
Query: 576 SGAVKHDEDDVGLSLFQQMYRGFPSPNKFT 665
SG V+ D+ F++M + N +T
Sbjct: 322 SGFVQKDDSISAFHFFKEMRKVGEKINNYT 351
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/165 (24%), Positives = 74/165 (44%)
Frame = +3
Query: 174 LLRSYCKASAFVYALRLFDAIPHPDTSSWNLLITCQNQNLRYGDSWGTFCRMHSLGFIPN 353
L+ Y K A V A R+FD +P D S + L++ QN D+ F + +
Sbjct: 590 LVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWID 649
Query: 354 EFTYGSALSACIALSFVNCGKLLYSLALKHGFSLDGYVRCGMIDLFLKSSSFNDALRVFY 533
FT S + A L+ ++ G L++ K G + + V ++ ++ K S ++ +VF
Sbjct: 650 SFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFE 709
Query: 534 DESCGNVVCWNAIISGAVKHDEDDVGLSLFQQMYRGFPSPNKFTF 668
+++ W A+I +H + L ++ M + P+ TF
Sbjct: 710 QIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTF 754
Score = 59.7 bits (143), Expect = 5e-07
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Frame = +3
Query: 99 EETKIIHTHFLKTNTFHTNPEFSNFLLRSYCKASAFVYALRLFDAIPHP-DTSSWNLLIT 275
+E +H+ KT F+ + S+ L+ Y K + R+F + + + W ++I+
Sbjct: 366 KEAVQLHSWIFKTG-FYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMIS 424
Query: 276 CQNQNLRYGDSWGTFCRMHSLGFIPNEFTYGSALSACIALSFVNCGKLLYSLALKHGFSL 455
Q+ G + F RM G P++F S LS +LS G+L++ LK G
Sbjct: 425 AFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL---GRLIHCYILKIGLFT 481
Query: 456 DGYVRCGMIDLFLKSSSFNDALRVFYDESCGNVVCWNAIISGAVKHDEDDVGLSLFQQMY 635
D V + ++ K S ++ VF + V W ++I+G +HD + + LF++M
Sbjct: 482 DISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREML 541
Query: 636 RGFPSPNKFT 665
P++ T
Sbjct: 542 LEEIRPDQMT 551
>ref|XP_002511573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550688|gb|EEF52175.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 954
Score = 222 bits (565), Expect = 6e-56
Identities = 110/207 (53%), Positives = 137/207 (66%)
Frame = +3
Query: 48 DPSQFLNESAKSRNFTFEETKIIHTHFLKTNTFHTNPEFSNFLLRSYCKASAFVYALRLF 227
DP F KS + T EETK+IHTH +KT F++N +N LL YCK+ A YAL++F
Sbjct: 49 DPFHFFTNYIKSADHTVEETKVIHTHLIKTALFNSNTVVANSLLDWYCKSGALFYALKVF 108
Query: 228 DAIPHPDTSSWNLLITCQNQNLRYGDSWGTFCRMHSLGFIPNEFTYGSALSACIALSFVN 407
D IP+ + SWN++I+ N+N + DSW F MH GF PN+ TYG LSAC AL N
Sbjct: 109 DTIPNKNVISWNVIISGYNRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPN 168
Query: 408 CGKLLYSLALKHGFSLDGYVRCGMIDLFLKSSSFNDALRVFYDESCGNVVCWNAIISGAV 587
G+ +YSLA K+GF +G+VR GMIDL ++ F DALRVFYD SC NVVCWN+IISGAV
Sbjct: 169 LGEQVYSLATKNGFYSNGHVRAGMIDLLARNGRFGDALRVFYDVSCENVVCWNSIISGAV 228
Query: 588 KHDEDDVGLSLFQQMYRGFPSPNKFTF 668
K E + L +F QM R F PN FTF
Sbjct: 229 KSGEYWIALDIFYQMSRRFVVPNSFTF 255
Score = 78.6 bits (192), Expect = 1e-12
Identities = 50/176 (28%), Positives = 85/176 (48%)
Frame = +3
Query: 138 NTFHTNPEFSNFLLRSYCKASAFVYALRLFDAIPHPDTSSWNLLITCQNQNLRYGDSWGT 317
N F++N ++ + F ALR+F + + WN +I+ ++ Y +
Sbjct: 180 NGFYSNGHVRAGMIDLLARNGRFGDALRVFYDVSCENVVCWNSIISGAVKSGEYWIALDI 239
Query: 318 FCRMHSLGFIPNEFTYGSALSACIALSFVNCGKLLYSLALKHGFSLDGYVRCGMIDLFLK 497
F +M +PN FT+ S L+AC +L V GK + +K + D +V +++++ K
Sbjct: 240 FYQMSRRFVVPNSFTFSSILTACASLEEVELGKGIQGWVIKC-CAKDIFVGTAIVNMYAK 298
Query: 498 SSSFNDALRVFYDESCGNVVCWNAIISGAVKHDEDDVGLSLFQQMYRGFPSPNKFT 665
DA++ F NVV W AI+SG +K D+ L F++M + NKFT
Sbjct: 299 CGDIVDAVKEFSRMPVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETNKFT 354
Score = 59.7 bits (143), Expect = 5e-07
Identities = 40/165 (24%), Positives = 72/165 (43%)
Frame = +3
Query: 174 LLRSYCKASAFVYALRLFDAIPHPDTSSWNLLITCQNQNLRYGDSWGTFCRMHSLGFIPN 353
L+ Y K A A ++FD + D S + L++ QN ++ F M F +
Sbjct: 593 LVNMYSKCGALESARKMFDLLAVKDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTID 652
Query: 354 EFTYGSALSACIALSFVNCGKLLYSLALKHGFSLDGYVRCGMIDLFLKSSSFNDALRVFY 533
F S L A L+ ++ G L++ +K G D V ++ ++ K S D + F
Sbjct: 653 SFAVSSVLGAIAGLNRLDFGTQLHAHLVKLGLDSDVSVGSSLVTVYSKCGSIEDCWKAFN 712
Query: 534 DESCGNVVCWNAIISGAVKHDEDDVGLSLFQQMYRGFPSPNKFTF 668
+++ W +I+ +H + L +++QM R P+ TF
Sbjct: 713 QIDDADLISWTTMIASCAQHGKGVEALKIYEQMRREGIRPDSVTF 757
Score = 57.4 bits (137), Expect = 2e-06
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 3/202 (1%)
Frame = +3
Query: 72 SAKSRNFTFEETKIIHTHFLKTNTFHTNPEFSNFLLRSYCKASAFVYALRLF---DAIPH 242
SA ++ +E IH LKT ++ +P L+ Y K A + +F + + +
Sbjct: 360 SACAKPHFIKEAIQIHCWILKTG-YYLDPVVGAALINMYAKLHAISSSEMVFREMEGVKN 418
Query: 243 PDTSSWNLLITCQNQNLRYGDSWGTFCRMHSLGFIPNEFTYGSALSACIALSFVNCGKLL 422
P W ++I+ +N + ++ G P++F S LS +L G+ +
Sbjct: 419 PGI--WTIMISSFAKNQDSQSAIDLLLKLLQQGLRPDKFCLSSVLSVIDSLYL---GREI 473
Query: 423 YSLALKHGFSLDGYVRCGMIDLFLKSSSFNDALRVFYDESCGNVVCWNAIISGAVKHDED 602
+ LK GF LD V + ++ K S D+ +VF + + W ++ISG +H
Sbjct: 474 HCYILKTGFVLDLSVGSSLFTMYSKCGSIGDSYKVFEQIPVKDNISWTSMISGFTEHGHA 533
Query: 603 DVGLSLFQQMYRGFPSPNKFTF 668
L ++M P++ TF
Sbjct: 534 YQAFELLRKMLTERSKPDQTTF 555
>emb|CAN63945.1| hypothetical protein VITISV_035426 [Vitis vinifera]
Length = 325
Score = 180 bits (457), Expect = 2e-43
Identities = 95/193 (49%), Positives = 120/193 (62%)
Frame = +3
Query: 45 FDPSQFLNESAKSRNFTFEETKIIHTHFLKTNTFHTNPEFSNFLLRSYCKASAFVYALRL 224
FD + KS TKI++ H LK +N + L+ YCK+++ V+A +L
Sbjct: 132 FDHFHIFSNYTKSERCILRNTKILYAHLLKIVILQSNTFMVDSLMDWYCKSNSMVHAPKL 191
Query: 225 FDAIPHPDTSSWNLLITCQNQNLRYGDSWGTFCRMHSLGFIPNEFTYGSALSACIALSFV 404
FD PHP+ SW++LI+ NQN + DSW F R LGF PN+FTYGS LSACIAL
Sbjct: 192 FDKTPHPNVISWDILISGCNQNFSFEDSWRNFVRCVFLGFDPNQFTYGSVLSACIALESP 251
Query: 405 NCGKLLYSLALKHGFSLDGYVRCGMIDLFLKSSSFNDALRVFYDESCGNVVCWNAIISGA 584
G+L+ SLALK+GF +GYV+ MIDLF K SF D L VF D C NVVCWNAI+S A
Sbjct: 252 LYGELVCSLALKNGFFSNGYVQAEMIDLFTKLCSFEDVLWVFQDVLCENVVCWNAIVSEA 311
Query: 585 VKHDEDDVGLSLF 623
VK+ E+ V L LF
Sbjct: 312 VKNKENWVALDLF 324
>ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical
protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 137 bits (346), Expect = 1e-30
Identities = 75/214 (35%), Positives = 112/214 (52%)
Frame = +3
Query: 27 SNFSITFDPSQFLNESAKSRNFTFEETKIIHTHFLKTNTFHTNPEFSNFLLRSYCKASAF 206
S+ S F+P +F N+ + SR TKI+ H L+ + + LL Y + +
Sbjct: 41 SSSSAPFNPFRFFNDQSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSM 100
Query: 207 VYALRLFDAIPHPDTSSWNLLITCQNQNLRYGDSWGTFCRMHSLGFIPNEFTYGSALSAC 386
A +LFD IP PD S N++I+ Q+ + +S F +MH LGF NE +YGS +SAC
Sbjct: 101 ADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISAC 160
Query: 387 IALSFVNCGKLLYSLALKHGFSLDGYVRCGMIDLFLKSSSFNDALRVFYDESCGNVVCWN 566
AL +L+ +K G+ V +ID+F K+ F DA +VF D NV CWN
Sbjct: 161 SALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWN 220
Query: 567 AIISGAVKHDEDDVGLSLFQQMYRGFPSPNKFTF 668
II+GA+++ LF +M GF P+ +T+
Sbjct: 221 TIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTY 254
Score = 64.3 bits (155), Expect = 2e-08
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Frame = +3
Query: 174 LLRSYCKASAFVYALRLFDAIPHPDTSSWNLLITCQNQNLRYGDSWGTFCRMHSLGFI-P 350
L+ + K F A ++F + WN +I +N YG + F M +GF P
Sbjct: 191 LIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CVGFQKP 249
Query: 351 NEFTYGSALSACIALSFVNCGKLLYSLALKHGFSLDGYVRCGMIDLFLKSSSFNDALRVF 530
+ +TY S L+AC +L + GK++ + +K G D +V ++DL+ K +A+ VF
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 531 YDESCGNVVCWNAIISGAVKHDEDDVGLSLFQQM 632
+VV W ++SG K ++ L +F++M
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342
Score = 58.9 bits (141), Expect = 8e-07
Identities = 42/187 (22%), Positives = 81/187 (43%)
Frame = +3
Query: 108 KIIHTHFLKTNTFHTNPEFSNFLLRSYCKASAFVYALRLFDAIPHPDTSSWNLLITCQNQ 287
K IH + L+ + + L+ Y K + A +++D +P D S + LI+ +Q
Sbjct: 571 KEIHGYTLRAG-IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQ 629
Query: 288 NLRYGDSWGTFCRMHSLGFIPNEFTYGSALSACIALSFVNCGKLLYSLALKHGFSLDGYV 467
+ D + F M GF + F S L A + G +++ K G + V
Sbjct: 630 HGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSV 689
Query: 468 RCGMIDLFLKSSSFNDALRVFYDESCGNVVCWNAIISGAVKHDEDDVGLSLFQQMYRGFP 647
++ ++ K S +D + F + +++ W A+I+ +H + + L ++ M
Sbjct: 690 GSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGF 749
Query: 648 SPNKFTF 668
P+K TF
Sbjct: 750 KPDKVTF 756
Score = 57.4 bits (137), Expect = 2e-06
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 1/189 (0%)
Frame = +3
Query: 102 ETKIIHTHFLKTNTFHTNPEFSNFLLRSYCKASAFVYALRLFDAIPHPDTSSW-NLLITC 278
E +H K+ F+ + + L+ Y K+ + ++F+ + + N++IT
Sbjct: 369 EASQVHAWVFKSG-FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITS 427
Query: 279 QNQNLRYGDSWGTFCRMHSLGFIPNEFTYGSALSACIALSFVNCGKLLYSLALKHGFSLD 458
+Q+ + G + F RM G +EF+ S LS L +N GK ++ LK G LD
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLD 484
Query: 459 GYVRCGMIDLFLKSSSFNDALRVFYDESCGNVVCWNAIISGAVKHDEDDVGLSLFQQMYR 638
V + L+ K S ++ ++F + CW ++ISG ++ + LF +M
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD 544
Query: 639 GFPSPNKFT 665
SP++ T
Sbjct: 545 DGTSPDEST 553
>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 117 bits (293), Expect = 2e-24
Identities = 66/190 (34%), Positives = 101/190 (53%)
Frame = +3
Query: 99 EETKIIHTHFLKTNTFHTNPEFSNFLLRSYCKASAFVYALRLFDAIPHPDTSSWNLLITC 278
+E K++H H L +N H + N LL Y + + A RLFD +PH D SW +IT
Sbjct: 91 KEGKLVHFHVLNSNFKH-DLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITG 149
Query: 279 QNQNLRYGDSWGTFCRMHSLGFIPNEFTYGSALSACIALSFVNCGKLLYSLALKHGFSLD 458
QN R D+ F RM S G PNEFT S + C ++ NCG+ +++ K+G +
Sbjct: 150 YAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSN 209
Query: 459 GYVRCGMIDLFLKSSSFNDALRVFYDESCGNVVCWNAIISGAVKHDEDDVGLSLFQQMYR 638
+V ++D++ + +A+ VF C N V WNA+I+G + E + L+LF +M R
Sbjct: 210 VFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQR 269
Query: 639 GFPSPNKFTF 668
P +FT+
Sbjct: 270 EGYRPTEFTY 279
Score = 79.7 bits (195), Expect = 5e-13
Identities = 51/174 (29%), Positives = 82/174 (47%)
Frame = +3
Query: 147 HTNPEFSNFLLRSYCKASAFVYALRLFDAIPHPDTSSWNLLITCQNQNLRYGDSWGTFCR 326
H+N + L+ Y + A+ +FD + + SWN LI + ++ F R
Sbjct: 207 HSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVR 266
Query: 327 MHSLGFIPNEFTYGSALSACIALSFVNCGKLLYSLALKHGFSLDGYVRCGMIDLFLKSSS 506
M G+ P EFTY + LS+C ++ + GK L++ +K L GYV ++ ++ KS S
Sbjct: 267 MQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGS 326
Query: 507 FNDALRVFYDESCGNVVCWNAIISGAVKHDEDDVGLSLFQQMYRGFPSPNKFTF 668
DA +VF +VV N+++ G +H F +M R PN TF
Sbjct: 327 IRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITF 380