BLASTX nr result

ID: Atractylodes22_contig00043336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043336
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ94676.1| carotenoid cleavage dioxygenase 4b [Vitis vinifera]    129   2e-28
emb|CBI29184.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002270161.1| PREDICTED: probable carotenoid cleavage diox...   129   2e-28
ref|XP_002326037.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
gb|ABK96278.1| unknown [Populus trichocarpa x Populus deltoides]      125   4e-27

>gb|AFJ94676.1| carotenoid cleavage dioxygenase 4b [Vitis vinifera]
          Length = 589

 Score =  129 bits (324), Expect = 2e-28
 Identities = 55/82 (67%), Positives = 65/82 (79%)
 Frame = +3

Query: 21  SLLEKVFRTLDEAITKFLDPPLDLSVDPSYILSDNFAPVDEISPTECEVVHGSIPPCLDG 200
           SLL  +F  LD+ I  F+ PPL  S+DP ++LS NFAPVDE+ PTECEV+ GS+PPCLDG
Sbjct: 80  SLLVTIFNGLDDFINNFIGPPLPPSIDPKHVLSGNFAPVDELPPTECEVIEGSLPPCLDG 139

Query: 201 VYIRNGPNPQFHPSGPHHYFDG 266
            YIRNGPNPQF+P GPHH FDG
Sbjct: 140 AYIRNGPNPQFYPRGPHHLFDG 161


>emb|CBI29184.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  129 bits (324), Expect = 2e-28
 Identities = 55/82 (67%), Positives = 65/82 (79%)
 Frame = +3

Query: 21  SLLEKVFRTLDEAITKFLDPPLDLSVDPSYILSDNFAPVDEISPTECEVVHGSIPPCLDG 200
           SLL  +F  LD+ I  F+ PPL  S+DP ++LS NFAPVDE+ PTECEV+ GS+PPCLDG
Sbjct: 111 SLLVTIFNGLDDFINNFIGPPLPPSIDPKHVLSGNFAPVDELPPTECEVIEGSLPPCLDG 170

Query: 201 VYIRNGPNPQFHPSGPHHYFDG 266
            YIRNGPNPQF+P GPHH FDG
Sbjct: 171 AYIRNGPNPQFYPRGPHHLFDG 192



 Score =  121 bits (304), Expect = 5e-26
 Identities = 54/82 (65%), Positives = 62/82 (75%)
 Frame = +3

Query: 21  SLLEKVFRTLDEAITKFLDPPLDLSVDPSYILSDNFAPVDEISPTECEVVHGSIPPCLDG 200
           SL   +F  LD+ I  F+DPPL  SVDP Y+LS NFAPV+E+ PTECEV  GS+PP LDG
Sbjct: 559 SLPVTIFNALDDVINNFIDPPLRSSVDPRYVLSQNFAPVEELPPTECEVTDGSLPPWLDG 618

Query: 201 VYIRNGPNPQFHPSGPHHYFDG 266
            YIRNGPNPQF P GP+H FDG
Sbjct: 619 AYIRNGPNPQFLPRGPYHLFDG 640


>ref|XP_002270161.1| PREDICTED: probable carotenoid cleavage dioxygenase 4,
           chloroplastic [Vitis vinifera]
          Length = 589

 Score =  129 bits (324), Expect = 2e-28
 Identities = 55/82 (67%), Positives = 65/82 (79%)
 Frame = +3

Query: 21  SLLEKVFRTLDEAITKFLDPPLDLSVDPSYILSDNFAPVDEISPTECEVVHGSIPPCLDG 200
           SLL  +F  LD+ I  F+ PPL  S+DP ++LS NFAPVDE+ PTECEV+ GS+PPCLDG
Sbjct: 80  SLLVTIFNGLDDFINNFIGPPLPPSIDPKHVLSGNFAPVDELPPTECEVIEGSLPPCLDG 139

Query: 201 VYIRNGPNPQFHPSGPHHYFDG 266
            YIRNGPNPQF+P GPHH FDG
Sbjct: 140 AYIRNGPNPQFYPRGPHHLFDG 161


>ref|XP_002326037.1| predicted protein [Populus trichocarpa] gi|222862912|gb|EEF00419.1|
           predicted protein [Populus trichocarpa]
          Length = 589

 Score =  125 bits (314), Expect = 4e-27
 Identities = 53/77 (68%), Positives = 62/77 (80%)
 Frame = +3

Query: 36  VFRTLDEAITKFLDPPLDLSVDPSYILSDNFAPVDEISPTECEVVHGSIPPCLDGVYIRN 215
           +F  L+  I  F+DPPL  SVDP Y+LSDNFAPVDE+ PTECEV+HGS+P CLDG YIRN
Sbjct: 84  MFNVLEGVINNFIDPPLRQSVDPRYVLSDNFAPVDELPPTECEVIHGSLPSCLDGAYIRN 143

Query: 216 GPNPQFHPSGPHHYFDG 266
           GPNPQ+ P GP+H FDG
Sbjct: 144 GPNPQYLPRGPYHLFDG 160


>gb|ABK96278.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 507

 Score =  125 bits (314), Expect = 4e-27
 Identities = 53/77 (68%), Positives = 62/77 (80%)
 Frame = +3

Query: 36  VFRTLDEAITKFLDPPLDLSVDPSYILSDNFAPVDEISPTECEVVHGSIPPCLDGVYIRN 215
           +F  L+  I  F+DPPL  SVDP Y+LSDNFAPVDE+ PTECEV+HGS+P CLDG YIRN
Sbjct: 2   MFNVLEGVINNFIDPPLRQSVDPRYVLSDNFAPVDELPPTECEVIHGSLPSCLDGAYIRN 61

Query: 216 GPNPQFHPSGPHHYFDG 266
           GPNPQ+ P GP+H FDG
Sbjct: 62  GPNPQYLPRGPYHLFDG 78


Top