BLASTX nr result

ID: Atractylodes22_contig00043333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043333
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15850.3| unnamed protein product [Vitis vinifera]              160   8e-38
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   160   8e-38
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   160   8e-38
ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatul...   154   7e-36
ref|XP_003518335.1| PREDICTED: putative tRNA pseudouridine synth...   153   2e-35

>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/139 (53%), Positives = 101/139 (72%)
 Frame = -2

Query: 418 LPILAKWIFKPDEKDRVFEYHFRTIFHCSCGTPKHLFGASYVEISICGDSFMLDQVLKMV 239
           L + A+W+  PDE+DR+   HFR IF+CSCG  +   G  YVE+SICG+SFML Q+ KMV
Sbjct: 303 LVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMV 362

Query: 238 GAAVAVKRGLLLRDVIPLSLCKFARFTLPIAPPELLFLQWNHYFVKSKPGKAARPEIRTM 59
           G A+AVKR LL RD++ LSL KF+R  LP+AP E+L L+ N + V+ KPG   RPE+ T+
Sbjct: 363 GTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTL 422

Query: 58  VESEEIQSDVEDFYKSIML 2
           +ESEEI   V++FY S++L
Sbjct: 423 MESEEILKSVDEFYTSVIL 441


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/139 (53%), Positives = 101/139 (72%)
 Frame = -2

Query: 418 LPILAKWIFKPDEKDRVFEYHFRTIFHCSCGTPKHLFGASYVEISICGDSFMLDQVLKMV 239
           L + A+W+  PDE+DR+   HFR IF+CSCG  +   G  YVE+SICG+SFML Q+ KMV
Sbjct: 324 LVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMV 383

Query: 238 GAAVAVKRGLLLRDVIPLSLCKFARFTLPIAPPELLFLQWNHYFVKSKPGKAARPEIRTM 59
           G A+AVKR LL RD++ LSL KF+R  LP+AP E+L L+ N + V+ KPG   RPE+ T+
Sbjct: 384 GTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTL 443

Query: 58  VESEEIQSDVEDFYKSIML 2
           +ESEEI   V++FY S++L
Sbjct: 444 MESEEILKSVDEFYTSVIL 462


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/139 (53%), Positives = 101/139 (72%)
 Frame = -2

Query: 418 LPILAKWIFKPDEKDRVFEYHFRTIFHCSCGTPKHLFGASYVEISICGDSFMLDQVLKMV 239
           L + A+W+  PDE+DR+   HFR IF+CSCG  +   G  YVE+SICG+SFML Q+ KMV
Sbjct: 324 LVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMV 383

Query: 238 GAAVAVKRGLLLRDVIPLSLCKFARFTLPIAPPELLFLQWNHYFVKSKPGKAARPEIRTM 59
           G A+AVKR LL RD++ LSL KF+R  LP+AP E+L L+ N + V+ KPG   RPE+ T+
Sbjct: 384 GTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTL 443

Query: 58  VESEEIQSDVEDFYKSIML 2
           +ESEEI   V++FY S++L
Sbjct: 444 MESEEILKSVDEFYTSVIL 462


>ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatula]
           gi|355517306|gb|AES98929.1| Pseudouridylate synthase
           [Medicago truncatula]
          Length = 501

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/137 (54%), Positives = 100/137 (72%)
 Frame = -2

Query: 412 ILAKWIFKPDEKDRVFEYHFRTIFHCSCGTPKHLFGASYVEISICGDSFMLDQVLKMVGA 233
           + AKW+++PDE DR+   HFR +F CS G  +   G SY+EI I G+SFML Q+ KMV  
Sbjct: 311 VRAKWLYEPDEADRLNASHFRRVFRCSSGKLEKSMGHSYIEIYIEGESFMLHQIRKMVAT 370

Query: 232 AVAVKRGLLLRDVIPLSLCKFARFTLPIAPPELLFLQWNHYFVKSKPGKAARPEIRTMVE 53
           AVAVKR LL RD+I LSL KF+R  LP+AP E+L L+ N + +++KPG   RPE++T+VE
Sbjct: 371 AVAVKRKLLPRDIITLSLSKFSRIILPLAPSEVLLLRGNSFSMRTKPGNVTRPEMQTIVE 430

Query: 52  SEEIQSDVEDFYKSIML 2
           SEEI   V+DFY+S+ML
Sbjct: 431 SEEINKVVDDFYRSVML 447


>ref|XP_003518335.1| PREDICTED: putative tRNA pseudouridine synthase-like, partial
           [Glycine max]
          Length = 453

 Score =  153 bits (386), Expect = 2e-35
 Identities = 71/135 (52%), Positives = 100/135 (74%)
 Frame = -2

Query: 406 AKWIFKPDEKDRVFEYHFRTIFHCSCGTPKHLFGASYVEISICGDSFMLDQVLKMVGAAV 227
           A+W+++PDE DR+   HFR +F CSCG  +   G +Y+EISI G+SFML Q+ KMVG AV
Sbjct: 281 ARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGYNYIEISIQGESFMLHQIRKMVGTAV 340

Query: 226 AVKRGLLLRDVIPLSLCKFARFTLPIAPPELLFLQWNHYFVKSKPGKAARPEIRTMVESE 47
           AVKR  L +D+I LSL +F+R  LP+AP E L L+ N + ++++PG   RPE++T+V+SE
Sbjct: 341 AVKRKALPKDIIKLSLTRFSRIILPLAPSEALILRGNRFSIRTRPGNITRPEMQTIVKSE 400

Query: 46  EIQSDVEDFYKSIML 2
           EI+  V+DFY S+ML
Sbjct: 401 EIKKAVDDFYTSVML 415


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