BLASTX nr result

ID: Atractylodes22_contig00043231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043231
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36804.3| unnamed protein product [Vitis vinifera]              370   e-100
ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, par...   315   1e-83
ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   315   1e-83
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab...   307   2e-81
ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thalia...   306   5e-81

>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  370 bits (951), Expect = e-100
 Identities = 177/245 (72%), Positives = 206/245 (84%), Gaps = 4/245 (1%)
 Frame = +3

Query: 105 QPDSKIFSVRIVSVDYYMSPPIPGLDLCYSSFQGGKANEVPVIRIYGSTPAGQKTCLHIH 284
           Q D+KIFSVRIVS+DYYM+PPIP LD+CYSSFQGG   EVPVIRIYGSTP GQKTCLH+H
Sbjct: 5   QDDAKIFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQKTCLHVH 64

Query: 285 QALPYLYVPCSDIVHQPDQEGDACVRLISLALEKALKLKGHAGSKRQHVHGCSLVRARRF 464
           +ALPYLYVPC+D++ Q  QE D     +SL +EKALKLKG+AGSKRQHVHGCSLVRA+ F
Sbjct: 65  RALPYLYVPCTDLMPQSPQEADTYTHAVSLGVEKALKLKGNAGSKRQHVHGCSLVRAKNF 124

Query: 465 YGYDASEQLYAKIYL---YHPRDVSRAANLLLGGSVLEKSLQPHESHIPFLLQFLVDYNL 635
           YGY +SE+L+ KIYL   YHP DVSRAANLLLGGSVL+KSLQPHESHIPFLLQFL+DYNL
Sbjct: 125 YGYHSSEELFVKIYLNISYHPHDVSRAANLLLGGSVLDKSLQPHESHIPFLLQFLIDYNL 184

Query: 636 HGMGHLHVSKMKFRLPVPHVFAKRKSNYYAEDKQQMDK-SSMATNSQADSSGDVCLESPI 812
           +GMGHLH+SKMKFR PVP VF+ RK NY  + K + D  + ++ + QADSSGD CL SP+
Sbjct: 185 YGMGHLHLSKMKFRHPVPDVFSSRKVNYNGQQKLEPDDFACISAHLQADSSGDTCLSSPV 244

Query: 813 WLSST 827
           W+SST
Sbjct: 245 WISST 249


>ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
          Length = 1591

 Score =  315 bits (806), Expect = 1e-83
 Identities = 153/246 (62%), Positives = 196/246 (79%), Gaps = 6/246 (2%)
 Frame = +3

Query: 105 QPDSKIFSVRIVSVDYYMSPPIPGLDLCYSSFQGGKANEVPVIRIYGSTPAGQKTCLHIH 284
           Q +S++FSVRIVS+DYY++PPIPGLD+ YSSFQGGK NEVPV+RIYGSTPAGQKTC+H+H
Sbjct: 5   QSESRVFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVH 64

Query: 285 QALPYLYVPCSDIVHQPDQEG---DACVRLISLALEKALKLKGHAGSKRQHVHGCSLVRA 455
             LPYLYVPCS+I+   + +G   +A    +SLALEKALKLKG++GSKRQHVHG +LVRA
Sbjct: 65  GVLPYLYVPCSEILLPLNDKGVGGEALGNNVSLALEKALKLKGNSGSKRQHVHGYNLVRA 124

Query: 456 RRFYGYDASEQLYAKIYLYHPRDVSRAANLLLGGSVLEKSLQPHESHIPFLLQFLVDYNL 635
           ++ YGY +SE+L+ KIYLY+P+D++RAANLLL G+VLEKS QP+ESHIPF+LQFLVDYNL
Sbjct: 125 KKLYGYHSSEELFIKIYLYYPQDITRAANLLLNGAVLEKSFQPYESHIPFVLQFLVDYNL 184

Query: 636 HGMGHLHVSKMKFRLPVPHVFAKRKSNY--YAEDKQQMDK-SSMATNSQADSSGDVCLES 806
           +GMG LH+ K+KFR PVP    K+      Y  +   MD  + M ++ QAD+S +    S
Sbjct: 185 YGMGLLHLVKLKFRHPVPDAPGKKLDEIFRYMHENHAMDNPNCMPSDPQADTSNEAASTS 244

Query: 807 PIWLSS 824
           P+W+SS
Sbjct: 245 PVWISS 250


>ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222413 [Cucumis sativus]
          Length = 2868

 Score =  315 bits (806), Expect = 1e-83
 Identities = 153/246 (62%), Positives = 196/246 (79%), Gaps = 6/246 (2%)
 Frame = +3

Query: 105 QPDSKIFSVRIVSVDYYMSPPIPGLDLCYSSFQGGKANEVPVIRIYGSTPAGQKTCLHIH 284
           Q +S++FSVRIVS+DYY++PPIPGLD+ YSSFQGGK NEVPV+RIYGSTPAGQKTC+H+H
Sbjct: 5   QSESRVFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVH 64

Query: 285 QALPYLYVPCSDIVHQPDQEG---DACVRLISLALEKALKLKGHAGSKRQHVHGCSLVRA 455
             LPYLYVPCS+I+   + +G   +A    +SLALEKALKLKG++GSKRQHVHG +LVRA
Sbjct: 65  GVLPYLYVPCSEILLPLNDKGVGGEALGNNVSLALEKALKLKGNSGSKRQHVHGYNLVRA 124

Query: 456 RRFYGYDASEQLYAKIYLYHPRDVSRAANLLLGGSVLEKSLQPHESHIPFLLQFLVDYNL 635
           ++ YGY +SE+ + KIYLY+P+D++RAANLLL G+VLEKSLQP+ESHIPF+LQFLVDYNL
Sbjct: 125 KKLYGYHSSEEFFIKIYLYYPQDITRAANLLLNGAVLEKSLQPYESHIPFVLQFLVDYNL 184

Query: 636 HGMGHLHVSKMKFRLPVPHVFAKRKSNY--YAEDKQQMDK-SSMATNSQADSSGDVCLES 806
           +GMG LH+ K+KFR PVP    K+      Y  +   MD  + M ++ QAD+S +    S
Sbjct: 185 YGMGLLHLVKLKFRHPVPDAPGKKLDEIFRYMHENHAMDNPNCMPSDPQADTSNEAASTS 244

Query: 807 PIWLSS 824
           P+W+SS
Sbjct: 245 PVWISS 250


>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
           lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
           ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
          Length = 1899

 Score =  307 bits (786), Expect = 2e-81
 Identities = 151/246 (61%), Positives = 190/246 (77%), Gaps = 5/246 (2%)
 Frame = +3

Query: 105 QPDSKIFSVRIVSVDYYMSPPIPGLDLCYSSFQGGKANEVPVIRIYGSTPAGQKTCLHIH 284
           Q  S +FS+RIVS+DYYM+ PIPG D+CYSSFQGG+ NEVPVIRIYGSTPAGQKTCLHIH
Sbjct: 5   QSGSNVFSLRIVSIDYYMASPIPGYDICYSSFQGGEVNEVPVIRIYGSTPAGQKTCLHIH 64

Query: 285 QALPYLYVPCSDIVHQPDQEGDACVRLISLALEKALKLKGHAGSKRQHVHGCSLVRARRF 464
           +ALPYLY+PCS+I  +  +  D     +SL LEKALKLKG+A SKRQHVH C +VRA++F
Sbjct: 65  RALPYLYIPCSEIPLEHHKGADGSTLALSLELEKALKLKGNAASKRQHVHDCEIVRAKKF 124

Query: 465 YGYDASEQLYAKIYL-----YHPRDVSRAANLLLGGSVLEKSLQPHESHIPFLLQFLVDY 629
           YGY ++E+ + KIYL     YHP DV+RAA+LLL G+VL KSLQP+ESHIPF+LQFLVDY
Sbjct: 125 YGYHSTEEAFVKIYLYPCNSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDY 184

Query: 630 NLHGMGHLHVSKMKFRLPVPHVFAKRKSNYYAEDKQQMDKSSMATNSQADSSGDVCLESP 809
           NL+GM H+H+SKMKFR PVPH F  R+ +      Q++D+ ++   ++A+SS    +  P
Sbjct: 185 NLYGMCHVHISKMKFRSPVPHHFLPRRFDLEDCAGQRIDEVAI---TKANSSAAASVSFP 241

Query: 810 IWLSST 827
           IW  ST
Sbjct: 242 IWSLST 247


>ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
           gi|34330129|dbj|BAC82450.1| catalytic subunit of
           polymerase zeta [Arabidopsis thaliana]
           gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit
           [Arabidopsis thaliana]
          Length = 1890

 Score =  306 bits (783), Expect = 5e-81
 Identities = 148/242 (61%), Positives = 190/242 (78%), Gaps = 1/242 (0%)
 Frame = +3

Query: 105 QPDSKIFSVRIVSVDYYMSPPIPGLDLCYSSFQGGKANEVPVIRIYGSTPAGQKTCLHIH 284
           Q  S +FS+RIVS+DYYM+ PIPG ++CYSSFQG + NEVPVIRIYGSTPAGQKTCLHIH
Sbjct: 5   QSGSNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIH 64

Query: 285 QALPYLYVPCSDIVHQPDQEGDACVRLISLALEKALKLKGHAGSKRQHVHGCSLVRARRF 464
           +ALPYLY+PCS+I  +  +  D     +SL LEKALKLKG+A SKRQH+H C +VRA++F
Sbjct: 65  RALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASKRQHIHDCEIVRAKKF 124

Query: 465 YGYDASEQLYAKIYL-YHPRDVSRAANLLLGGSVLEKSLQPHESHIPFLLQFLVDYNLHG 641
           YGY ++E+ + KIYL YHP DV+RAA+LLL G+VL KSLQP+ESHIPF+LQFLVDYNL+G
Sbjct: 125 YGYHSTEEAFVKIYLSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDYNLYG 184

Query: 642 MGHLHVSKMKFRLPVPHVFAKRKSNYYAEDKQQMDKSSMATNSQADSSGDVCLESPIWLS 821
           MGH+H+SKMKFR PVPH F  R+ +      Q++D+ ++   ++A+SS    +  P+W  
Sbjct: 185 MGHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEVAI---TKANSSAAASVSFPVWSL 241

Query: 822 ST 827
           ST
Sbjct: 242 ST 243


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