BLASTX nr result

ID: Atractylodes22_contig00043218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043218
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533116.1| pentatricopeptide repeat-containing protein,...   100   9e-20
emb|CBI22241.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containi...    91   7e-17
ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi...    91   7e-17

>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1204

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/99 (47%), Positives = 70/99 (70%)
 Frame = -2

Query: 297  LIQDLCVSHKMEEALDLYTEMLNRKLMPSTKTHEVVTEKLCESGRTSEAEKLIDNMVCTG 118
            +IQ LC+ +++ EA+D +TEML+R+L PS KT  ++   LC+ GRT+EAE L+ +M   G
Sbjct: 1053 IIQGLCIWNQLNEAMDFHTEMLDRELRPSMKTWNMIVHNLCQLGRTAEAEGLLISMAQLG 1112

Query: 117  ECPSKAMFGWVVSRYRLERNFGKASEVLQRMQQFGYKPD 1
            E P   M+  V++RYR E N  KAS+++Q MQ+ GY+PD
Sbjct: 1113 ETPPGKMYSTVINRYRFENNPRKASQLMQMMQRNGYEPD 1151


>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/99 (46%), Positives = 68/99 (68%)
 Frame = -2

Query: 297  LIQDLCVSHKMEEALDLYTEMLNRKLMPSTKTHEVVTEKLCESGRTSEAEKLIDNMVCTG 118
            +IQ  C  ++++EA+D +TEML+RKL PS K  + +  K C+ GRT+EAE L+ +MV  G
Sbjct: 1115 VIQGFCTVNRLDEAMDFHTEMLDRKLRPSIKAWDALAHKFCQDGRTAEAESLLVSMVQMG 1174

Query: 117  ECPSKAMFGWVVSRYRLERNFGKASEVLQRMQQFGYKPD 1
            E P++ M+  +++R R E N  KASE+LQ MQ  G+ PD
Sbjct: 1175 ETPTREMYTSLINRLRSENNLSKASELLQAMQLSGHAPD 1213


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Vitis vinifera]
          Length = 1273

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/99 (46%), Positives = 68/99 (68%)
 Frame = -2

Query: 297  LIQDLCVSHKMEEALDLYTEMLNRKLMPSTKTHEVVTEKLCESGRTSEAEKLIDNMVCTG 118
            +IQ  C  ++++EA+D +TEML+RKL PS K  + +  K C+ GRT+EAE L+ +MV  G
Sbjct: 1132 VIQGFCTVNRLDEAMDFHTEMLDRKLRPSIKAWDALAHKFCQDGRTAEAESLLVSMVQMG 1191

Query: 117  ECPSKAMFGWVVSRYRLERNFGKASEVLQRMQQFGYKPD 1
            E P++ M+  +++R R E N  KASE+LQ MQ  G+ PD
Sbjct: 1192 ETPTREMYTSLINRLRSENNLSKASELLQAMQLSGHAPD 1230


>ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Cucumis sativus]
          Length = 1225

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/99 (44%), Positives = 65/99 (65%)
 Frame = -2

Query: 297  LIQDLCVSHKMEEALDLYTEMLNRKLMPSTKTHEVVTEKLCESGRTSEAEKLIDNMVCTG 118
            +IQ  C   K+EEA+D +TEML+R+L PS +T + +   LC  G+T EAE+++ +M   G
Sbjct: 1083 VIQSCCAYKKLEEAVDFHTEMLDRRLKPSIRTWDKLVYLLCREGQTKEAERVLMSMTAMG 1142

Query: 117  ECPSKAMFGWVVSRYRLERNFGKASEVLQRMQQFGYKPD 1
            E PSK  +  ++ RYR E N  KASE ++ MQ+ GY+ D
Sbjct: 1143 EKPSKDAYCSMLDRYRYENNLEKASETMKAMQESGYELD 1181


>ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Cucumis sativus]
          Length = 1246

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/99 (44%), Positives = 65/99 (65%)
 Frame = -2

Query: 297  LIQDLCVSHKMEEALDLYTEMLNRKLMPSTKTHEVVTEKLCESGRTSEAEKLIDNMVCTG 118
            +IQ  C   K+EEA+D +TEML+R+L PS +T + +   LC  G+T EAE+++ +M   G
Sbjct: 1104 VIQSCCAYKKLEEAVDFHTEMLDRRLKPSIRTWDKLVYLLCREGQTKEAERVLMSMTAMG 1163

Query: 117  ECPSKAMFGWVVSRYRLERNFGKASEVLQRMQQFGYKPD 1
            E PSK  +  ++ RYR E N  KASE ++ MQ+ GY+ D
Sbjct: 1164 EKPSKDAYCSMLDRYRYENNLEKASETMKAMQESGYELD 1202


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