BLASTX nr result

ID: Atractylodes22_contig00043215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043215
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173356.1| hypothetical protein NitaMp008 [Nicotiana tabac...   146   2e-33
emb|CAD41625.1| OSJNBa0091D06.10 [Oryza sativa Japonica Group]        143   2e-32
gb|AAD04177.1| putative integrase [Oryza sativa Indica Group]         142   4e-32
gb|ABA98562.1| retrotransposon protein, putative, Ty3-gypsy subc...   142   4e-32
gb|ABA98196.1| retrotransposon protein, putative, Ty3-gypsy subc...   142   4e-32

>ref|YP_173356.1| hypothetical protein NitaMp008 [Nicotiana tabacum]
           gi|56806518|dbj|BAD83419.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 215

 Score =  146 bits (368), Expect = 2e-33
 Identities = 62/85 (72%), Positives = 74/85 (87%)
 Frame = -1

Query: 256 EAHSSPFSIHPGSTKMYRDMKLHFWWSGMKRDVAEHVARCLTCQKVKAEHQRPGGLLQPL 77
           EAHSSPF +HPGSTKMYR ++ H+WW GMKRDVAE+VA+CL CQ VKAEHQRP G LQP+
Sbjct: 35  EAHSSPFFLHPGSTKMYRTIRPHYWWKGMKRDVAEYVAKCLVCQLVKAEHQRPAGPLQPV 94

Query: 76  DIPVWKWEDISMDFVTGLPKTFRKH 2
            IP WKW++I+MDFV+GLPKT R+H
Sbjct: 95  QIPQWKWDEIAMDFVSGLPKTARQH 119


>emb|CAD41625.1| OSJNBa0091D06.10 [Oryza sativa Japonica Group]
          Length = 1831

 Score =  143 bits (360), Expect = 2e-32
 Identities = 62/81 (76%), Positives = 71/81 (87%)
 Frame = -1

Query: 256  EAHSSPFSIHPGSTKMYRDMKLHFWWSGMKRDVAEHVARCLTCQKVKAEHQRPGGLLQPL 77
            EAH S +SIHPGSTKMY+D+K +FWWSGMKRDVAE+VA C  CQ+VKAEHQRP GLLQPL
Sbjct: 1437 EAHESAYSIHPGSTKMYQDIKAYFWWSGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPL 1496

Query: 76   DIPVWKWEDISMDFVTGLPKT 14
             IP WKWE+I MDF+TGLP+T
Sbjct: 1497 PIPEWKWEEIGMDFITGLPRT 1517


>gb|AAD04177.1| putative integrase [Oryza sativa Indica Group]
          Length = 218

 Score =  142 bits (357), Expect = 4e-32
 Identities = 61/81 (75%), Positives = 71/81 (87%)
 Frame = -1

Query: 256 EAHSSPFSIHPGSTKMYRDMKLHFWWSGMKRDVAEHVARCLTCQKVKAEHQRPGGLLQPL 77
           EAH S +SIHPGSTKMY+D+K +FWW+GMKRDVAE+VA C  CQ+VKAEHQRP GLLQPL
Sbjct: 54  EAHQSAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPL 113

Query: 76  DIPVWKWEDISMDFVTGLPKT 14
            IP WKWE+I MDF+TGLP+T
Sbjct: 114 PIPEWKWEEIGMDFITGLPRT 134


>gb|ABA98562.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1824

 Score =  142 bits (357), Expect = 4e-32
 Identities = 61/81 (75%), Positives = 71/81 (87%)
 Frame = -1

Query: 256  EAHSSPFSIHPGSTKMYRDMKLHFWWSGMKRDVAEHVARCLTCQKVKAEHQRPGGLLQPL 77
            EAH S +SIHPGSTKMY+D+K +FWW+GMKRDVAE+VA C  CQ+VKAEHQRP GLLQPL
Sbjct: 1409 EAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPL 1468

Query: 76   DIPVWKWEDISMDFVTGLPKT 14
             IP WKWE+I MDF+TGLP+T
Sbjct: 1469 PIPEWKWEEIGMDFITGLPRT 1489


>gb|ABA98196.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1510

 Score =  142 bits (357), Expect = 4e-32
 Identities = 61/81 (75%), Positives = 71/81 (87%)
 Frame = -1

Query: 256  EAHSSPFSIHPGSTKMYRDMKLHFWWSGMKRDVAEHVARCLTCQKVKAEHQRPGGLLQPL 77
            EAH S +SIHPGSTKMY+D+K +FWW+GMKRDVAE+VA C  CQ+VKAEHQRP GLLQPL
Sbjct: 1165 EAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPL 1224

Query: 76   DIPVWKWEDISMDFVTGLPKT 14
             IP WKWE+I MDF+TGLP+T
Sbjct: 1225 PIPEWKWEEIGMDFITGLPRT 1245


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