BLASTX nr result

ID: Atractylodes22_contig00043195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043195
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi...   301   1e-79
emb|CBI28142.3| unnamed protein product [Vitis vinifera]              301   1e-79
ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containi...   289   7e-76
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi...   288   1e-75
ref|XP_002529360.1| pentatricopeptide repeat-containing protein,...   285   9e-75

>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like
            [Vitis vinifera]
          Length = 662

 Score =  301 bits (772), Expect = 1e-79
 Identities = 146/226 (64%), Positives = 185/226 (81%)
 Frame = +3

Query: 21   THIY*GVLVIGKTSKALQLFSEMKKSGFRPDDITFIGVLNACSHGGLVEEGRRHFESMKS 200
            T I  G+ + GKTSKAL+LF+EM ++G +PDDITFIGVL+ACSHGGLVEEGR+HF SM +
Sbjct: 435  TSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTA 494

Query: 201  VYQIEPKIEHYGCLIDLLGRAGLLKEAEKIVNEIPKEKDEILVPVYGALLSACRLYGDVD 380
            VYQIEPK+EHYGCLIDLLGRAG L EAE+++ + P   +E++VP+YGALLSACR +G+V+
Sbjct: 495  VYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVE 554

Query: 381  MGEHLADRLSEIEDGDSSIHTLMANIYASAGRWEDVKKVRSKMRASGVRKEPGCSSIEVN 560
            MGE +A RL  IE GDSS+HTL+ANIYASA RWEDV KVR KM+  GV+K PGCSS+EVN
Sbjct: 555  MGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVN 614

Query: 561  GNVHEFLVGDASHPEMKDVYSSLNTLMKMSSASEKYDVGLDNMVPV 698
            G VHEFLVGDASHPEM+++YS L+++ K     ++ ++  +  VPV
Sbjct: 615  GIVHEFLVGDASHPEMREIYSMLDSIAKPLLGLDENEMEGEIPVPV 660


>emb|CBI28142.3| unnamed protein product [Vitis vinifera]
          Length = 571

 Score =  301 bits (772), Expect = 1e-79
 Identities = 146/226 (64%), Positives = 185/226 (81%)
 Frame = +3

Query: 21   THIY*GVLVIGKTSKALQLFSEMKKSGFRPDDITFIGVLNACSHGGLVEEGRRHFESMKS 200
            T I  G+ + GKTSKAL+LF+EM ++G +PDDITFIGVL+ACSHGGLVEEGR+HF SM +
Sbjct: 344  TSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTA 403

Query: 201  VYQIEPKIEHYGCLIDLLGRAGLLKEAEKIVNEIPKEKDEILVPVYGALLSACRLYGDVD 380
            VYQIEPK+EHYGCLIDLLGRAG L EAE+++ + P   +E++VP+YGALLSACR +G+V+
Sbjct: 404  VYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVE 463

Query: 381  MGEHLADRLSEIEDGDSSIHTLMANIYASAGRWEDVKKVRSKMRASGVRKEPGCSSIEVN 560
            MGE +A RL  IE GDSS+HTL+ANIYASA RWEDV KVR KM+  GV+K PGCSS+EVN
Sbjct: 464  MGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVN 523

Query: 561  GNVHEFLVGDASHPEMKDVYSSLNTLMKMSSASEKYDVGLDNMVPV 698
            G VHEFLVGDASHPEM+++YS L+++ K     ++ ++  +  VPV
Sbjct: 524  GIVHEFLVGDASHPEMREIYSMLDSIAKPLLGLDENEMEGEIPVPV 569


>ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like
            [Cucumis sativus]
          Length = 781

 Score =  289 bits (739), Expect = 7e-76
 Identities = 142/204 (69%), Positives = 169/204 (82%)
 Frame = +3

Query: 21   THIY*GVLVIGKTSKALQLFSEMKKSGFRPDDITFIGVLNACSHGGLVEEGRRHFESMKS 200
            T I  G+ + GKTS+AL+LFSEM++ G +PDDITFIGVL+ACSHGGLVEEGRR F SMK 
Sbjct: 546  TSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKK 605

Query: 201  VYQIEPKIEHYGCLIDLLGRAGLLKEAEKIVNEIPKEKDEILVPVYGALLSACRLYGDVD 380
            V++IEPK+EHYGC+IDLLGRAGLL EAE+++ EIP E  EI+VP+YGALLSACR++ +VD
Sbjct: 606  VHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVD 665

Query: 381  MGEHLADRLSEIEDGDSSIHTLMANIYASAGRWEDVKKVRSKMRASGVRKEPGCSSIEVN 560
            MGE LA +L  IE  DSSIHTL+ANIYAS  RWED KKVR KM+  GV+K PGCS IEV+
Sbjct: 666  MGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVD 725

Query: 561  GNVHEFLVGDASHPEMKDVYSSLN 632
            G VHEFLVGD SHPEM ++ S LN
Sbjct: 726  GIVHEFLVGDPSHPEMMEICSMLN 749


>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
            At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score =  288 bits (737), Expect = 1e-75
 Identities = 142/204 (69%), Positives = 169/204 (82%)
 Frame = +3

Query: 21   THIY*GVLVIGKTSKALQLFSEMKKSGFRPDDITFIGVLNACSHGGLVEEGRRHFESMKS 200
            T I  G+ + GKTS+AL+LFSEM++ G +PDDITFIGVL+ACSHGGLVEEGRR F SMK 
Sbjct: 500  TSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKK 559

Query: 201  VYQIEPKIEHYGCLIDLLGRAGLLKEAEKIVNEIPKEKDEILVPVYGALLSACRLYGDVD 380
            V++IEPK+EHYGC+IDLLGRAGLL EAE+++ EIP E  EI+VP+YGALLSACR++ +VD
Sbjct: 560  VHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVD 619

Query: 381  MGEHLADRLSEIEDGDSSIHTLMANIYASAGRWEDVKKVRSKMRASGVRKEPGCSSIEVN 560
            MGE LA +L  IE  DSSIHTL+ANIYAS  RWED KKVR KM+  GV+K PGCS IEV+
Sbjct: 620  MGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVD 679

Query: 561  GNVHEFLVGDASHPEMKDVYSSLN 632
            G VHEFLVGD SHPEM ++ S LN
Sbjct: 680  GIVHEFLVGDPSHPEMIEICSMLN 703


>ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531180|gb|EEF33027.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 683

 Score =  285 bits (729), Expect = 9e-75
 Identities = 137/224 (61%), Positives = 176/224 (78%)
 Frame = +3

Query: 21   THIY*GVLVIGKTSKALQLFSEMKKSGFRPDDITFIGVLNACSHGGLVEEGRRHFESMKS 200
            T I  G+ + GKTSKAL+LFS+MK++G RPDDITFIGVL+ACSHGGLVEEGR+ F SM+ 
Sbjct: 440  TSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRM 499

Query: 201  VYQIEPKIEHYGCLIDLLGRAGLLKEAEKIVNEIPKEKDEILVPVYGALLSACRLYGDVD 380
             YQI+PK+EHYGCL+DLLGRAGLL EAE+++ +IP E   I VP+YG+LLSACR+YG+V+
Sbjct: 500  EYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVE 559

Query: 381  MGEHLADRLSEIEDGDSSIHTLMANIYASAGRWEDVKKVRSKMRASGVRKEPGCSSIEVN 560
            MGE +A +L + E  DSS+HTL+ANIYA A RWEDV KVR KM+  GV+K PGCSSIEV+
Sbjct: 560  MGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVD 619

Query: 561  GNVHEFLVGDASHPEMKDVYSSLNTLMKMSSASEKYDVGLDNMV 692
              +HEF  G  SHPEM+++Y  LN + K    S K ++  +++V
Sbjct: 620  SIIHEFFSGHPSHPEMREIYYMLNIMAKPLLGSAKNEMEGEDLV 663


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