BLASTX nr result

ID: Atractylodes22_contig00043152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043152
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514903.1| conserved hypothetical protein [Ricinus comm...   124   1e-26
ref|XP_002297845.1| f-box family protein [Populus trichocarpa] g...   120   9e-26
gb|ACL51019.1| F-box family protein [Citrus trifoliata]               117   1e-24
emb|CBI27666.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002271194.1| PREDICTED: F-box only protein 6-like [Vitis ...   116   2e-24

>ref|XP_002514903.1| conserved hypothetical protein [Ricinus communis]
           gi|223545954|gb|EEF47457.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 470

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/107 (59%), Positives = 81/107 (75%), Gaps = 7/107 (6%)
 Frame = +2

Query: 2   RWCFLNLENNPSEDDCCDLVMMARKS---KMLEPGKVTPSKRTQKERKQTETSGSNDTME 172
           RWC L++ N+ S DD CDLVM A KS   KMLEP K  PSK+++KER + +  G+ +T E
Sbjct: 56  RWCVLDI-NDGSADDYCDLVMAAGKSGRCKMLEPSKPPPSKKSKKERNRGKLLGTTNTTE 114

Query: 173 ----EIWRYFPEDLYEAVVARLPIATFFRFRSVCQNWNSLLTSNSFA 301
               EIW+ FPEDL+EAV+ARLPIATFFRFR+VC+ WNSLL+S SF+
Sbjct: 115 VMEEEIWKDFPEDLFEAVIARLPIATFFRFRTVCRKWNSLLSSESFS 161


>ref|XP_002297845.1| f-box family protein [Populus trichocarpa]
           gi|222845103|gb|EEE82650.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score =  120 bits (302), Expect = 9e-26
 Identities = 63/107 (58%), Positives = 77/107 (71%), Gaps = 7/107 (6%)
 Frame = +2

Query: 2   RWCFLNLENNPSEDDCCDLVMMARKS---KMLEPGKVTPSKRTQKERKQTETSGSNDTME 172
           RWCFLNL++  S DD C LVM A KS   KMLEP K  PSK+ +KER + ++ G+  + E
Sbjct: 67  RWCFLNLDDG-SADDYCSLVMAAGKSGSFKMLEPCKPPPSKKPRKERNRGKSLGTTSSTE 125

Query: 173 ----EIWRYFPEDLYEAVVARLPIATFFRFRSVCQNWNSLLTSNSFA 301
               EIW+ FPEDL+EAV+ARLPI TFFRFRSVC+ WNS L S SF+
Sbjct: 126 VMQQEIWKEFPEDLFEAVIARLPITTFFRFRSVCRKWNSFLDSQSFS 172


>gb|ACL51019.1| F-box family protein [Citrus trifoliata]
          Length = 468

 Score =  117 bits (292), Expect = 1e-24
 Identities = 63/107 (58%), Positives = 77/107 (71%), Gaps = 7/107 (6%)
 Frame = +2

Query: 2   RWCFLNLENNPSEDDCCDLVMMARKS---KMLEPGKVTPSKRTQKERKQTETSGSNDTME 172
           RWC   ++++ + DD    VM A KS   KMLEP K  PSKR++KER + + +GS  T E
Sbjct: 54  RWCLPEVDDSAA-DDYYGFVMAAGKSGSCKMLEPVKPPPSKRSRKERNRGKLAGSTSTAE 112

Query: 173 ----EIWRYFPEDLYEAVVARLPIATFFRFRSVCQNWNSLLTSNSFA 301
               EIW+ FPEDLYEAV+ARLPIATFFRFRSVCQ WNSLL S+SF+
Sbjct: 113 AMEQEIWKEFPEDLYEAVIARLPIATFFRFRSVCQKWNSLLESHSFS 159


>emb|CBI27666.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/107 (52%), Positives = 78/107 (72%), Gaps = 7/107 (6%)
 Frame = +2

Query: 2   RWCFLNLENNPSEDDCCDLVMMARKS---KMLEPGKVTPSKRTQKERKQTETSGSNDTME 172
           RWCF N +++ +EDD CD +M + KS   K +E  +  P+K+++KER + +  G+ ++ E
Sbjct: 40  RWCFSNFDDDSAEDDYCDPIMRSGKSGTLKTMETYEPPPTKKSRKERNRGKLPGTTNSAE 99

Query: 173 ----EIWRYFPEDLYEAVVARLPIATFFRFRSVCQNWNSLLTSNSFA 301
               EIW+ FPEDL+EAV+ARLPIATFFRFR VC+ WNSLL SNSF+
Sbjct: 100 VMEQEIWKEFPEDLFEAVIARLPIATFFRFRLVCRKWNSLLNSNSFS 146


>ref|XP_002271194.1| PREDICTED: F-box only protein 6-like [Vitis vinifera]
          Length = 522

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/107 (52%), Positives = 78/107 (72%), Gaps = 7/107 (6%)
 Frame = +2

Query: 2   RWCFLNLENNPSEDDCCDLVMMARKS---KMLEPGKVTPSKRTQKERKQTETSGSNDTME 172
           RWCF N +++ +EDD CD +M + KS   K +E  +  P+K+++KER + +  G+ ++ E
Sbjct: 107 RWCFSNFDDDSAEDDYCDPIMRSGKSGTLKTMETYEPPPTKKSRKERNRGKLPGTTNSAE 166

Query: 173 ----EIWRYFPEDLYEAVVARLPIATFFRFRSVCQNWNSLLTSNSFA 301
               EIW+ FPEDL+EAV+ARLPIATFFRFR VC+ WNSLL SNSF+
Sbjct: 167 VMEQEIWKEFPEDLFEAVIARLPIATFFRFRLVCRKWNSLLNSNSFS 213


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