BLASTX nr result

ID: Atractylodes22_contig00043106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043106
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    68   7e-10
gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK...    68   7e-10
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    63   3e-08
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    62   5e-08
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    60   1e-07

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3    KGLCFRCGQQFGPG-HRCPEARLQVILLADDEIVAEDGEIRSLADMGNIVPTELKEMNAG 179
            KGLCF+CG ++ P  H+CPE  L+V++L + E V E+GEI SL +   ++  E +E+ + 
Sbjct: 938  KGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSL-ETQEVLEEEEEEIES- 995

Query: 180  ECSILDFYGAVKGSPAEFKIVKLEGCLLGIPIVMLVDCG 296
            EC ++     V GS  E+  +K+ G L  I +V+LVD G
Sbjct: 996  ECKVI----GVLGSMGEYNTMKIGGKLENIDVVVLVDSG 1030


>gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown
           [Medicago truncatula]
          Length = 185

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   KGLCFRCGQQFGPG-HRCPEARLQVILLADDEIVAEDGEIRSLADMGNIVPTELKEMNAG 179
           KGLCF+CG ++ P  H+CPE  L+V++L + E V E+GEI SL +   ++  E +E+ + 
Sbjct: 7   KGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSL-ETQEVLEEEEEEIES- 64

Query: 180 ECSILDFYGAVKGSPAEFKIVKLEGCLLGIPIVMLVDCG 296
           EC ++     V GS  E+  +K+ G L  I +V+LVD G
Sbjct: 65  ECKVI----GVLGSMGEYNTMKIGGKLENIDVVVLVDSG 99


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/98 (33%), Positives = 57/98 (58%)
 Frame = +3

Query: 3   KGLCFRCGQQFGPGHRCPEARLQVILLADDEIVAEDGEIRSLADMGNIVPTELKEMNAGE 182
           KGLCF+CG  F P H+CP+ +L+V++L +DE    +G++ +       V  + +E   GE
Sbjct: 110 KGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKLLA-------VEVDDEEEGDGE 162

Query: 183 CSILDFYGAVKGSPAEFKIVKLEGCLLGIPIVMLVDCG 296
             +++F+      P   + +KL G +  +P+V+LVD G
Sbjct: 163 MCMMEFFHLGHSRP---QSIKLMGVIKEVPVVVLVDSG 197


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   KGLCFRCGQQFGPG-HRCPEARLQVILLADDEIVAEDGEIRSLADMGNIVPTELKEMNAG 179
           KGLCF+CG ++ P  H+CPE  L+V++L + E + ++GEI +   M  + P   +E+   
Sbjct: 313 KGLCFKCGGKYHPTLHKCPERALRVLILGEGEALNDEGEIMA---MEAVQPDSEEEIEV- 368

Query: 180 ECSILDFYGAVKGSPAEFKIVKLEGCLLGIPIVMLVDCG 296
           EC  +     V GS  E + +K+EG +  + +++L+D G
Sbjct: 369 ECKSM----GVLGSMGEHRTMKIEGKIENVDVLVLIDSG 403


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   KGLCFRCGQQFGPG-HRCPEARLQVILLADDEIVAEDGEIRSLADMGNIVPTELKEMNAG 179
           KGLCF+CG ++ P  H+C E  L+V++L + E + ++GEI S+ D    V  E +E    
Sbjct: 329 KGLCFKCGGKYHPTFHKCLERALRVLILGEGETMTKEGEIVSMKD----VTVESEEEVEV 384

Query: 180 ECSILDFYGAVKGSPAEFKIVKLEGCLLGIPIVMLVDCG 296
           EC ++     V GS  E   +++EG +  + +++L+D G
Sbjct: 385 ECKLM----GVLGSMGESHTMRVEGKIHNVDLLVLIDSG 419


Top