BLASTX nr result

ID: Atractylodes22_contig00043073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043073
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-42
ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-42
ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
emb|CBI39966.3| unnamed protein product [Vitis vinifera]              173   1e-41
emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]   173   1e-41

>ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  176 bits (447), Expect = 1e-42
 Identities = 78/120 (65%), Positives = 105/120 (87%)
 Frame = +3

Query: 3   FEHMKIRDVVTWTALIYAYGMYGEGKMAITAFENMKAAGIIPDQIAFLAVIFACSHSRLV 182
           F++MK +DVVTWTALI A+GMYGEGK A+ AF++M+ +G++PD +AF+A IFACSHS +V
Sbjct: 581 FKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMV 640

Query: 183 ENGRAYFNQMNEEYNMEPKIEHYACVVDLLSRCGRLAEAEEFILSMPMRPDASIWGSLLS 362
           + G  +F++M  +YN+EP++EHYACVVDLL+R G LA+AEEFILSMPM+PDAS+WG+LLS
Sbjct: 641 KEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLS 700


>ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  176 bits (447), Expect = 1e-42
 Identities = 78/120 (65%), Positives = 105/120 (87%)
 Frame = +3

Query: 3   FEHMKIRDVVTWTALIYAYGMYGEGKMAITAFENMKAAGIIPDQIAFLAVIFACSHSRLV 182
           F++MK +DVVTWTALI A+GMYGEGK A+ AF++M+ +G++PD +AF+A IFACSHS +V
Sbjct: 581 FKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMV 640

Query: 183 ENGRAYFNQMNEEYNMEPKIEHYACVVDLLSRCGRLAEAEEFILSMPMRPDASIWGSLLS 362
           + G  +F++M  +YN+EP++EHYACVVDLL+R G LA+AEEFILSMPM+PDAS+WG+LLS
Sbjct: 641 KEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLS 700


>ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  173 bits (438), Expect = 1e-41
 Identities = 81/120 (67%), Positives = 101/120 (84%)
 Frame = +3

Query: 3   FEHMKIRDVVTWTALIYAYGMYGEGKMAITAFENMKAAGIIPDQIAFLAVIFACSHSRLV 182
           F+ MK +DVVTWTALI A GMYGEGK A+ AF  M+AAGI+PD +AF+A+IFACSHS LV
Sbjct: 575 FKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 634

Query: 183 ENGRAYFNQMNEEYNMEPKIEHYACVVDLLSRCGRLAEAEEFILSMPMRPDASIWGSLLS 362
           E G  YF++M ++Y +EP+IEHYACVVDLLSR   L +AE+FILSMP++PD+SIWG+LLS
Sbjct: 635 EEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLS 694


>emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  173 bits (438), Expect = 1e-41
 Identities = 81/120 (67%), Positives = 101/120 (84%)
 Frame = +3

Query: 3   FEHMKIRDVVTWTALIYAYGMYGEGKMAITAFENMKAAGIIPDQIAFLAVIFACSHSRLV 182
           F+ MK +DVVTWTALI A GMYGEGK A+ AF  M+AAGI+PD +AF+A+IFACSHS LV
Sbjct: 412 FKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 471

Query: 183 ENGRAYFNQMNEEYNMEPKIEHYACVVDLLSRCGRLAEAEEFILSMPMRPDASIWGSLLS 362
           E G  YF++M ++Y +EP+IEHYACVVDLLSR   L +AE+FILSMP++PD+SIWG+LLS
Sbjct: 472 EEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLS 531


>emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  173 bits (438), Expect = 1e-41
 Identities = 81/120 (67%), Positives = 101/120 (84%)
 Frame = +3

Query: 3   FEHMKIRDVVTWTALIYAYGMYGEGKMAITAFENMKAAGIIPDQIAFLAVIFACSHSRLV 182
           F+ MK +DVVTWTALI A GMYGEGK A+ AF  M+AAGI+PD +AF+A+IFACSHS LV
Sbjct: 634 FKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 693

Query: 183 ENGRAYFNQMNEEYNMEPKIEHYACVVDLLSRCGRLAEAEEFILSMPMRPDASIWGSLLS 362
           E G  YF++M ++Y +EP+IEHYACVVDLLSR   L +AE+FILSMP++PD+SIWG+LLS
Sbjct: 694 EEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLS 753


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