BLASTX nr result

ID: Atractylodes22_contig00043016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043016
         (1016 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28171.3| unnamed protein product [Vitis vinifera]              184   2e-44
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]   169   8e-40
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...   141   2e-31
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin...   122   2e-25
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin...   120   5e-25

>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  184 bits (468), Expect = 2e-44
 Identities = 137/353 (38%), Positives = 182/353 (51%), Gaps = 25/353 (7%)
 Frame = +2

Query: 2    RSESPDISATQCEENV-VRSDSLLPREEFVQNEXXXXXXXXXXXXXXXX-EREGWLESSP 175
            +S SP IS ++ EE   VRSDSLLP E F Q+                  E E   ESSP
Sbjct: 159  QSSSPQISMSEYEEAAAVRSDSLLPAEGFNQSRSLLSTDQSSEEQVDGPIEPEERWESSP 218

Query: 176  GFDVLVEGESERPGYEGDADYFTVHDEEGRELDVDYAECGYANPLEYDPAHPELENSLIE 355
            GFDVLV+  SE   YE + +Y    + EGREL+  +    + +P+EYD  +PE E     
Sbjct: 219  GFDVLVDNISENLVYEDEPEYLLALEGEGRELNGQFLGYDFEDPVEYDLMYPEAEILYDH 278

Query: 356  ERYGVYDRLDNKQARDYLGKISGQSRESIFYRLSFQKR-NSQAEPIFNGRRGSDLREHLK 532
              Y  +D LDN+ + D++  I G SRE I   +  +KR N   E    GR G DLR+ L+
Sbjct: 279  RIYDSFDCLDNEHSSDHVRNIPGCSRERILDPILPRKRKNFPVELAVTGRSGLDLRDRLR 338

Query: 533  KRKIADDSFQSCFSKGHDSPCLVDNRIRRNPRRHGSHCEIDIDHRGRLRKAVP------- 691
            KR++ D    + FS+ HDS CL+  R R   RRHG   ++       +RK +        
Sbjct: 339  KRRVTDGHTVTRFSRRHDSSCLI-GRTRERRRRHGMDQQLQGRSASEVRKNIIGMLSENE 397

Query: 692  -----------VNRYR----QQPLKDKRPGKPQFLPSEVSRSRKPALQHKRKSQEESSIF 826
                       V R R    +Q  K+K   + Q + SE   SRKP +  +R S  E + F
Sbjct: 398  TLSNRGNKQGWVRRSRLPKSRQHYKEKGHSQRQHISSE--DSRKP-VSRERISTREYTTF 454

Query: 827  TGPKTLDQIKEEKKKALENRDLPSIPASFNRTESDGFQGPRPLSEILKNKRKL 985
            TGPK+L QIKEEK+KA EN +        + T S  FQGP+PLSEILK+KRKL
Sbjct: 455  TGPKSLAQIKEEKRKAEENGEGFGKMGYSSNTPSADFQGPKPLSEILKDKRKL 507


>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
          Length = 554

 Score =  169 bits (429), Expect = 8e-40
 Identities = 129/352 (36%), Positives = 174/352 (49%), Gaps = 24/352 (6%)
 Frame = +2

Query: 2    RSESPDISATQCEENV-VRSDSLLPREEFVQNEXXXXXXXXXXXXXXXX-EREGWLESSP 175
            +S SP IS ++ EE   VRSDSLLP E F Q+                  E E   ESSP
Sbjct: 207  QSSSPQISMSEYEEAAAVRSDSLLPAEGFNQSRSLLSTDQSSEEQVDGPIEPEERWESSP 266

Query: 176  GFDVLVEGESERPGYEGDADYFTVHDEEGRELDVDYAECGYANPLEYDPAHPELENSLIE 355
            GFDVLV+  SE   YE + +Y    + EGREL+  +    + +P+EYD  +PE E     
Sbjct: 267  GFDVLVDNISENLVYEDEPEYLLALEGEGRELNGQFLGYDFEDPVEYDLMYPEAEILYDH 326

Query: 356  ERYGVYDRLDNKQARDYLGKISGQSRESIFYRLSFQKRNSQAEPIFNGRRGSDLREHLKK 535
              Y  +D LDN+  R++                  +++N   E    GR G DLR+ L+K
Sbjct: 327  RIYDSFDCLDNEHRREFW-----------ILFCPGKRKNFPVELAVTGRSGLDLRDRLRK 375

Query: 536  RKIADDSFQSCFSKGHDSPCLVDNRIRRNPRRHGSHCEIDIDHRGRLRKAVP-------- 691
            R++ D    + FS+ HDS CL+  R R   RRHG   ++       +RK +         
Sbjct: 376  RRVTDGHTVTRFSRRHDSSCLI-GRTRERRRRHGMDQQLQGRSASEVRKNIIGMLSENET 434

Query: 692  ----------VNRYR----QQPLKDKRPGKPQFLPSEVSRSRKPALQHKRKSQEESSIFT 829
                      V R R    +Q  K+K   + Q + SE   SRKP +  +R S  E + FT
Sbjct: 435  LSNRGNKQGWVRRSRLPKSRQHYKEKGHSQRQHISSE--DSRKP-VSRERISTREYTTFT 491

Query: 830  GPKTLDQIKEEKKKALENRDLPSIPASFNRTESDGFQGPRPLSEILKNKRKL 985
            GPK+L QIKEEK+KA EN +        + T S  FQGP+PLSEILK+KRKL
Sbjct: 492  GPKSLAQIKEEKRKAEENGEGFGKMGYSSNTPSADFQGPKPLSEILKDKRKL 543


>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223536251|gb|EEF37903.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 530

 Score =  141 bits (356), Expect = 2e-31
 Identities = 129/351 (36%), Positives = 171/351 (48%), Gaps = 24/351 (6%)
 Frame = +2

Query: 2    RSESPDISATQCEENVVRSDS-LLPREEFVQNEXXXXXXXXXXXXXXXX-EREGWLESSP 175
            RS SP I+ +Q EE V+ + S LL    F ++                  E E   ESSP
Sbjct: 182  RSPSPQIAVSQSEEAVILNPSFLLKVNSFTESRSLAYTTQSPEEEMDDHVEPEERWESSP 241

Query: 176  GFDVLVEGESERPGYEGDADYFTVHDEEGRELDVDYAECGYANPLEYDPAHPELENSLIE 355
            GFDVLV+ +SE   YE D +Y    D E R+ +  +    + N +EYD A+ + E+    
Sbjct: 242  GFDVLVDDKSENLDYEDDQEYLLPLDMEQRDPNNCFLGYDFENLVEYDHAYHDAEDDYGS 301

Query: 356  ERYGVYDRLDNKQARDYLGKISGQSRESIFYRLSFQKRNSQA-EPIFNGRRGSDLREHLK 532
             +Y   D  DN    D +G  SG SR S+   L  QKR   A E   N +R  DLR+ L 
Sbjct: 302  GKYDNTDFADNVHIFDDVGNDSGLSRNSVTDSLLSQKRKLVAMELSINDQRIVDLRDRLG 361

Query: 533  KRKIADDSFQSCFSKGHDSPCLVDN---RIRRNPRRHG------------------SHCE 649
            K +          S+ H S  L+ +   R   N R HG                  S   
Sbjct: 362  KDRAIHGHTVIRSSRRHYSSHLLGHGQGRPGSNQRPHGKLVLEVKSTAIEPHRKNGSQLY 421

Query: 650  IDIDHRGRLRKAVPVNRYRQQPLKDKRPGKPQFLPSEVSRSRKPALQHKRKSQEESSIFT 829
               DH G LR +   NR RQ+  K++R  + Q L SEV R  KPA + +RKS + S+ FT
Sbjct: 422  GGNDH-GWLRHSRS-NRSRQRD-KERRLARKQSLSSEVLR--KPASK-ERKSSQASTQFT 475

Query: 830  GPKTLDQIKEEKKKALENRDLPSIPASFNRTESDGFQGPRPLSEILKNKRK 982
            GPKTL QIKEEKKKA EN D      + +R  +  F+ P+PLSEILK+KR+
Sbjct: 476  GPKTLAQIKEEKKKAEENGDYTGKTDNSSRMATADFESPKPLSEILKDKRR 526


>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
            [Glycine max]
          Length = 526

 Score =  122 bits (305), Expect = 2e-25
 Identities = 108/349 (30%), Positives = 165/349 (47%), Gaps = 26/349 (7%)
 Frame = +2

Query: 17   DISATQCEENVV-RSDSLLPREEFVQN-EXXXXXXXXXXXXXXXXEREGWLESSP---GF 181
            ++SA++ +E  V RSDS +P + FV N                  E E W ESSP   GF
Sbjct: 185  ELSASEYKEAAVSRSDSSIPDDGFVHNVPHLCTGQSSEEQVNSHIEPEEWWESSPHSPGF 244

Query: 182  DVLVEGESERPGYEGDADYFTVHDEEGRELDVDYAECGYANPLEYDPAHPELENSLIEER 361
            DVLV  E E  GYE D++Y  V D + +EL+  Y    + +P+EYD   PE +    +E 
Sbjct: 245  DVLVHDEVENLGYEEDSEYLPVVDRDEQELNDQYFRYEFIDPVEYDTICPEADILYEQET 304

Query: 362  YGVYDRLDNKQARDYLGKISGQSRESIFYRLSFQKRNSQAEPIFNGRRGSDLREHLKKRK 541
            Y  Y  LD          +   + ++    +  +KR   +  +    +  DLR+HL++R+
Sbjct: 305  YDGYRCLDRDLIHVNGRTVHAYATDAFLDPILSRKRIRTSAEMAAYDKNLDLRDHLRRRR 364

Query: 542  IADDSFQSCFSKGHD-SPCLVDNR-------IRRNPRRH-------------GSHCEIDI 658
              +    + F +  + SP +V N+       I + P R              G    + I
Sbjct: 365  EVNGPPVTGFLRRQESSPLMVQNQERHLRHGIEQRPSRRLTSQLGYSAIDSTGEVETLSI 424

Query: 659  DHRGRLRKAVPVNRYRQQPLKDKRPGKPQFLPSEVSRSRKPALQHKRKSQEESSIFTGPK 838
             ++ RL +     ++R +    ++  K QF+ S++  SRKP  + +R    ESS F+GPK
Sbjct: 425  GNKRRLFRQSQAQQHRPRKNYIEKLPKRQFVSSKI--SRKPVFK-QRGLIHESSTFSGPK 481

Query: 839  TLDQIKEEKKKALENRDLPSIPASFNRTESDGFQGPRPLSEILKNKRKL 985
            TL +IKEEK K      L      +  T +D FQ P+PLSEILK KR +
Sbjct: 482  TLAEIKEEKMKKNAEGSL-----HWKSTSTD-FQDPKPLSEILKVKRTM 524


>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
            [Glycine max]
          Length = 524

 Score =  120 bits (301), Expect = 5e-25
 Identities = 111/350 (31%), Positives = 158/350 (45%), Gaps = 27/350 (7%)
 Frame = +2

Query: 17   DISATQCEENVV-RSDSLLPREEFVQN--EXXXXXXXXXXXXXXXXEREGWLES--SPGF 181
            ++SA++ +E  V RSDS +P + FV N                     E W  S  SPGF
Sbjct: 185  ELSASEYKEAAVSRSDSSIPDDGFVHNVPHLCTEQSSEEQVNSHIEPEERWESSPHSPGF 244

Query: 182  DVLVEGESERPGYEGDADYFTVHDEEGRELDVDYAECGYANPLEYDPAHPELENSLIEER 361
            DVLV  E +  GYE D++Y TV D + +ELD  Y    + + +EYD   PE +    +E 
Sbjct: 245  DVLVHDEVDNLGYEEDSEYVTVGDRDEQELDDQYFGYEFKDSVEYDTICPEADILYEQET 304

Query: 362  YGVYDRLDNKQARDYLGKISGQSRESIFYRLSFQKRNSQAEPIFNGRRGSDLREHLKKRK 541
            Y  Y  LD          I    R+        +KR   +  +    +  DLR+HL++R+
Sbjct: 305  YDGYRFLDRGLIHANGRTIHAYPRDVFLDPRLSRKRIRMSAEMAAYDKNLDLRDHLRRRR 364

Query: 542  IADDSFQSCFSKGHDSPCLVDNRIRRNPRRHG-------------SHCEID-IDHRGRLR 679
                   S F +   SP ++  R +   +RHG              +  ID I   G L 
Sbjct: 365  EIKGPPVSNFLRRESSPLMI--RKQERHQRHGIEQRPIRRLTSQLGYSAIDSIGEVGTLS 422

Query: 680  KAVPVNRYRQQPLKDKRP--------GKPQFLPSEVSRSRKPALQHKRKSQEESSIFTGP 835
             A     +R    +  +P         K QFL S++  SRKPA + +R    E S F+GP
Sbjct: 423  VANKHRLFRHSQAQQHKPRKHYREKLPKRQFLSSKI--SRKPAFK-QRGFIHEFSAFSGP 479

Query: 836  KTLDQIKEEKKKALENRDLPSIPASFNRTESDGFQGPRPLSEILKNKRKL 985
            KTL +IKEEK K  E        +   ++ S  FQ P+PLSEILK+KR +
Sbjct: 480  KTLAEIKEEKMKKAEG-------SLHWKSTSTDFQDPKPLSEILKDKRTM 522


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