BLASTX nr result

ID: Atractylodes22_contig00042986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042986
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79179.1| hypothetical protein VITISV_016730 [Vitis vinifera]   177   5e-42
ref|XP_002320807.1| predicted protein [Populus trichocarpa] gi|2...   139   1e-30
ref|XP_002302593.1| predicted protein [Populus trichocarpa] gi|2...   137   6e-30
ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-contai...   131   3e-28
emb|CBI34361.3| unnamed protein product [Vitis vinifera]              131   3e-28

>emb|CAN79179.1| hypothetical protein VITISV_016730 [Vitis vinifera]
          Length = 242

 Score =  177 bits (448), Expect = 5e-42
 Identities = 105/244 (43%), Positives = 136/244 (55%), Gaps = 7/244 (2%)
 Frame = -3

Query: 854 LNHQKSASV-----DRFSYLLDENQKLAIPVGPRFQADVPEWSGPPQRKYPHKTLSESDS 690
           +  QK+A +     DR  +L D  Q LAIP+G  FQA+VPEW G P + +P      SD+
Sbjct: 1   MGKQKNAELPKKEADRVKFLTDSAQ-LAIPIGSLFQAEVPEWIGVPNKHHPCDKDDASDT 59

Query: 689 SKWLGTVIWSNKDTS-SETDRDVIXXXXXXXXXXXXXGSILCVRGHISEKRAHLMKDLGP 513
           S+WLGT  W  + +S + +D D I             GS  CV+ HI EK A L +DLGP
Sbjct: 60  SRWLGTKSWPIEGSSITNSDADKIGNGRPDSCSCTSPGSAKCVKFHIQEKSAELQQDLGP 119

Query: 512 AFRSWKFDKMGE-IIAQTWKISEQQKFASIVKTNPISEGKNFIKPALECFPSKSHDAIVS 336
           AFR W F  MGE  + ++W   EQ+KF ++VK +P S+ K+F+KPA+E FPSKS   IVS
Sbjct: 120 AFRDWNFHTMGEEAVLRSWTAKEQRKFETLVKGHPPSQHKSFLKPAIEXFPSKSRKDIVS 179

Query: 335 YYFNVYLPRRICTQTRKGCXXXXXXXXXXXXXTPCSNGSRKRAQVDGVGHTSKIVIAGYL 156
           YY NV++PRRI   TR GC                S  SRKR Q D    +SK V   +L
Sbjct: 180 YYCNVFVPRRISKLTRAGCKTIDSDDDEPSEIIN-SKTSRKRCQADSTSSSSKQVKTPFL 238

Query: 155 TGRR 144
            G R
Sbjct: 239 RGHR 242


>ref|XP_002320807.1| predicted protein [Populus trichocarpa] gi|222861580|gb|EEE99122.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  139 bits (349), Expect = 1e-30
 Identities = 72/168 (42%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
 Frame = -3

Query: 785 IPVGPRFQADVPEWSGPPQRKYPHKTLSESDSSKWLGTVIWSNKDTSSE--TDRDVIXXX 612
           IPVGP FQA+VPEW+G           SESDS KWLGT +W  + + ++   +R+ I   
Sbjct: 224 IPVGPVFQAEVPEWTG---------MASESDS-KWLGTRVWPLETSINKFVIEREPIGKG 273

Query: 611 XXXXXXXXXXGSILCVRGHISEKRAHLMKDLGPAFRSWKFDKMGEIIAQTWKISEQQKFA 432
                      SI CVR HI+E+R+ +M++LG AF  W+FDKMGE +  +W + +Q+KF 
Sbjct: 274 RSDSCGCQVPKSIKCVRFHITERRSRVMRELGKAFNQWRFDKMGEEVKLSWSLEDQKKFG 333

Query: 431 SIVKTNPISEGKNFIKPALECFPSKSHDAIVSYYFNVYLPRRICTQTR 288
           +IV++NP+S  K F      CFPS+  + +VSYY+NV+L +R   Q R
Sbjct: 334 AIVRSNPLSLDKCFWDEIFRCFPSRRREDLVSYYYNVFLLQRRANQNR 381


>ref|XP_002302593.1| predicted protein [Populus trichocarpa] gi|222844319|gb|EEE81866.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  137 bits (344), Expect = 6e-30
 Identities = 70/168 (41%), Positives = 102/168 (60%), Gaps = 2/168 (1%)
 Frame = -3

Query: 785 IPVGPRFQADVPEWSGPPQRKYPHKTLSESDSSKWLGTVIWSNKDTSSE--TDRDVIXXX 612
           IPVGP FQA+VPEW+G          +S+SDS KWLGT +W  K + ++   +R+ I   
Sbjct: 73  IPVGPVFQAEVPEWTG---------VVSKSDS-KWLGTQVWPLKTSINKFVIEREPIGKG 122

Query: 611 XXXXXXXXXXGSILCVRGHISEKRAHLMKDLGPAFRSWKFDKMGEIIAQTWKISEQQKFA 432
                      SI CVR HI+E+R  +M++L  AF  W+FD+MGE +  +W + EQ+KF 
Sbjct: 123 RSDSCGCQVPKSIECVRFHITERRLRVMRELAKAFNQWRFDRMGEEVKLSWTVEEQKKFG 182

Query: 431 SIVKTNPISEGKNFIKPALECFPSKSHDAIVSYYFNVYLPRRICTQTR 288
           + V++NP+S  KNF     +CFP +  + +VSYY+NV+L +R   Q R
Sbjct: 183 ATVRSNPLSLDKNFWVEIFKCFPGRRREDLVSYYYNVFLLQRRANQNR 230


>ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-containing protein 2-like
           [Vitis vinifera]
          Length = 601

 Score =  131 bits (329), Expect = 3e-28
 Identities = 71/168 (42%), Positives = 98/168 (58%), Gaps = 2/168 (1%)
 Frame = -3

Query: 785 IPVGPRFQADVPEWSGPPQRKYPHKTLSESDSSKWLGTVIW--SNKDTSSETDRDVIXXX 612
           IPVGP FQA+VPEW+G          ++ESDS KWLGT +W   N + S   ++D +   
Sbjct: 397 IPVGPNFQAEVPEWTGE---------VTESDS-KWLGTQVWPLENGECSFRIEKDCVGRG 446

Query: 611 XXXXXXXXXXGSILCVRGHISEKRAHLMKDLGPAFRSWKFDKMGEIIAQTWKISEQQKFA 432
                     GS+ CVR HI+EKR  L  DLG  F  W+FD+MGE I+  W   E+++F 
Sbjct: 447 KPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEKRFK 506

Query: 431 SIVKTNPISEGKNFIKPALECFPSKSHDAIVSYYFNVYLPRRICTQTR 288
            +++ N   +  +F   AL  FP+K+ +A+VSYYFNV+L RR   Q R
Sbjct: 507 HMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNR 554


>emb|CBI34361.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  131 bits (329), Expect = 3e-28
 Identities = 71/168 (42%), Positives = 98/168 (58%), Gaps = 2/168 (1%)
 Frame = -3

Query: 785 IPVGPRFQADVPEWSGPPQRKYPHKTLSESDSSKWLGTVIW--SNKDTSSETDRDVIXXX 612
           IPVGP FQA+VPEW+G          ++ESDS KWLGT +W   N + S   ++D +   
Sbjct: 328 IPVGPNFQAEVPEWTGE---------VTESDS-KWLGTQVWPLENGECSFRIEKDCVGRG 377

Query: 611 XXXXXXXXXXGSILCVRGHISEKRAHLMKDLGPAFRSWKFDKMGEIIAQTWKISEQQKFA 432
                     GS+ CVR HI+EKR  L  DLG  F  W+FD+MGE I+  W   E+++F 
Sbjct: 378 KPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEKRFK 437

Query: 431 SIVKTNPISEGKNFIKPALECFPSKSHDAIVSYYFNVYLPRRICTQTR 288
            +++ N   +  +F   AL  FP+K+ +A+VSYYFNV+L RR   Q R
Sbjct: 438 HMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNR 485


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