BLASTX nr result

ID: Atractylodes22_contig00042928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042928
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321388.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002534336.1| WD-repeat protein, putative [Ricinus communi...   105   4e-21
ref|XP_004145945.1| PREDICTED: WD repeat-containing protein 44-l...   103   1e-20
emb|CBI23039.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002271917.1| PREDICTED: uncharacterized protein LOC100245...   102   2e-20

>ref|XP_002321388.1| predicted protein [Populus trichocarpa] gi|222868384|gb|EEF05515.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  112 bits (280), Expect = 3e-23
 Identities = 61/128 (47%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
 Frame = +1

Query: 4   RSYECFSAGASVALPWSGLKNTG--NGWGL---EEGXXXXXXXXXXXXXXXGQDYLLESM 168
           RSYE F+A ASVA+PW G+K  G  NGWG    +                  Q+Y +ES 
Sbjct: 598 RSYEHFTANASVAIPWCGMKYGGSENGWGFRVSDNSSQEVLPLSSPASFSLSQEYFVESF 657

Query: 169 RKGSATWPEEXXXXXXXXXXXXXXXXXXRYKFFTSSCQSSYSCHVWGLVIVTAGWDGRIR 348
            KGSATWPEE                  +YKF  +SCQS+ + H WGLVIVTAGWDGRI+
Sbjct: 658 PKGSATWPEEKLPSSPLSASSTMHKS--QYKFLKNSCQSTAASHAWGLVIVTAGWDGRIK 715

Query: 349 SFLNYGLP 372
           SF NYGLP
Sbjct: 716 SFHNYGLP 723


>ref|XP_002534336.1| WD-repeat protein, putative [Ricinus communis]
           gi|223525468|gb|EEF28046.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 714

 Score =  105 bits (262), Expect = 4e-21
 Identities = 62/132 (46%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
 Frame = +1

Query: 1   VRSYECFSAGASVALPWSGLK--NTGNGWGLEEGXXXXXXXXXXXXXXX---GQDYLLES 165
           +RS E FS  ASVA+PWSGL+  N  NGWG                      GQ+Y LES
Sbjct: 584 IRSCERFSTNASVAIPWSGLRHGNLRNGWGFHVSNGYSPEVMPFSSPASFFLGQEYFLES 643

Query: 166 MRKGSATWPEEXXXXXXXXXXXXXXXXXXRYKFFTSSCQSSYSCHVWGLVIVTAGWDGRI 345
             KGSATWPEE                    KF  +S Q++   H WGLVIVTAGWDGRI
Sbjct: 644 YPKGSATWPEEKLPVSSPFSASSGMNKS-HCKFLEASRQNTAISHAWGLVIVTAGWDGRI 702

Query: 346 RSFLNYGLPATV 381
           RSF NYGLP +V
Sbjct: 703 RSFHNYGLPVSV 714


>ref|XP_004145945.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
           gi|449528491|ref|XP_004171238.1| PREDICTED: WD
           repeat-containing protein 44-like [Cucumis sativus]
          Length = 720

 Score =  103 bits (258), Expect = 1e-20
 Identities = 61/132 (46%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
 Frame = +1

Query: 1   VRSYECFSAGASVALPWSGLK-NTGNGW----GLEEGXXXXXXXXXXXXXXXGQDYLLES 165
           ++SYE FS+ AS+A+PW GL+ NT  G     G++                  Q+ LLES
Sbjct: 591 IKSYEYFSSNASIAVPWYGLRCNTEAGERHFPGMQRNSSETFPLPSPAFFSLSQE-LLES 649

Query: 166 MRKGSATWPEEXXXXXXXXXXXXXXXXXXRYKFFTSSCQSSYSCHVWGLVIVTAGWDGRI 345
             KGSATWPEE                  RYKF   SCQ++ S H WGLVIVTAGWDGRI
Sbjct: 650 FPKGSATWPEEKLPTSSLLPKPSMMHKS-RYKFLKLSCQNTSSSHAWGLVIVTAGWDGRI 708

Query: 346 RSFLNYGLPATV 381
           RSF NYGLP  +
Sbjct: 709 RSFHNYGLPVPI 720


>emb|CBI23039.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  102 bits (255), Expect = 2e-20
 Identities = 58/130 (44%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
 Frame = +1

Query: 1   VRSYECFSAGASVALPWSGLK--NTGNGW---GLEEGXXXXXXXXXXXXXXXGQDYLLES 165
           +R++E F   ASVA+PW G+K  N  NGW    L+E                 Q++  ES
Sbjct: 545 IRAFEHFLTNASVAIPWCGMKYGNPENGWQFHALDESSPNTLPFPSPASFSLSQEFFSES 604

Query: 166 MRKGSATWPEEXXXXXXXXXXXXXXXXXXRYKFFTSSCQSSYSCHVWGLVIVTAGWDGRI 345
             KGSATWPEE                      F  +CQS+ S H WGLVIVTAGWDGRI
Sbjct: 605 FPKGSATWPEEKLPTSSLVSVPSKIHKSEHK--FLKACQSTSSSHAWGLVIVTAGWDGRI 662

Query: 346 RSFLNYGLPA 375
           RSF NYGLPA
Sbjct: 663 RSFHNYGLPA 672


>ref|XP_002271917.1| PREDICTED: uncharacterized protein LOC100245187 [Vitis vinifera]
          Length = 731

 Score =  102 bits (255), Expect = 2e-20
 Identities = 58/130 (44%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
 Frame = +1

Query: 1   VRSYECFSAGASVALPWSGLK--NTGNGW---GLEEGXXXXXXXXXXXXXXXGQDYLLES 165
           +R++E F   ASVA+PW G+K  N  NGW    L+E                 Q++  ES
Sbjct: 602 IRAFEHFLTNASVAIPWCGMKYGNPENGWQFHALDESSPNTLPFPSPASFSLSQEFFSES 661

Query: 166 MRKGSATWPEEXXXXXXXXXXXXXXXXXXRYKFFTSSCQSSYSCHVWGLVIVTAGWDGRI 345
             KGSATWPEE                      F  +CQS+ S H WGLVIVTAGWDGRI
Sbjct: 662 FPKGSATWPEEKLPTSSLVSVPSKIHKSEHK--FLKACQSTSSSHAWGLVIVTAGWDGRI 719

Query: 346 RSFLNYGLPA 375
           RSF NYGLPA
Sbjct: 720 RSFHNYGLPA 729


Top