BLASTX nr result

ID: Atractylodes22_contig00042899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042899
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19333.3| unnamed protein product [Vitis vinifera]              163   1e-38
ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g...   163   1e-38
emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]   163   1e-38
ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus ...   156   1e-36
ref|XP_002302373.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36

>emb|CBI19333.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  163 bits (413), Expect = 1e-38
 Identities = 90/154 (58%), Positives = 105/154 (68%), Gaps = 13/154 (8%)
 Frame = +3

Query: 3   QITTRLREHFFRDAFSSINHPLNHG-----PSFLSYIGRRVVSPPGRYS-----FNEFDA 152
           QITTRLR H FRDAFS +NHP N       P F  Y+ RR  SPPG YS     F++FDA
Sbjct: 458 QITTRLRHHHFRDAFS-VNHPSNPAFTDQVPPFPPYLARREFSPPGMYSNLGPSFHKFDA 516

Query: 153 G--IPPHGGFRLHDERPPFVRNFHTPGFPHHMSERSPASAPWGPQGIARGEPGGPLGFPD 326
              + PHGGF  HD+R PF+ + H  G P H+ ER P+SAPWG QG+  G  G P+G  D
Sbjct: 517 VGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGHQGLIEG--GVPIGLAD 574

Query: 327 FAGVPQRRIEGFGGGH-QAVITSTTVEVVVPRSV 425
           FAG PQRRI GFGGG+ QA+ITSTTVEVVVPRS+
Sbjct: 575 FAGGPQRRIPGFGGGNQQAIITSTTVEVVVPRSL 608


>ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 701

 Score =  163 bits (413), Expect = 1e-38
 Identities = 90/154 (58%), Positives = 105/154 (68%), Gaps = 13/154 (8%)
 Frame = +3

Query: 3   QITTRLREHFFRDAFSSINHPLNHG-----PSFLSYIGRRVVSPPGRYS-----FNEFDA 152
           QITTRLR H FRDAFS +NHP N       P F  Y+ RR  SPPG YS     F++FDA
Sbjct: 487 QITTRLRHHHFRDAFS-VNHPSNPAFTDQVPPFPPYLARREFSPPGMYSNLGPSFHKFDA 545

Query: 153 G--IPPHGGFRLHDERPPFVRNFHTPGFPHHMSERSPASAPWGPQGIARGEPGGPLGFPD 326
              + PHGGF  HD+R PF+ + H  G P H+ ER P+SAPWG QG+  G  G P+G  D
Sbjct: 546 VGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGHQGLIEG--GVPIGLAD 603

Query: 327 FAGVPQRRIEGFGGGH-QAVITSTTVEVVVPRSV 425
           FAG PQRRI GFGGG+ QA+ITSTTVEVVVPRS+
Sbjct: 604 FAGGPQRRIPGFGGGNQQAIITSTTVEVVVPRSL 637


>emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
          Length = 709

 Score =  163 bits (413), Expect = 1e-38
 Identities = 90/154 (58%), Positives = 105/154 (68%), Gaps = 13/154 (8%)
 Frame = +3

Query: 3   QITTRLREHFFRDAFSSINHPLNHG-----PSFLSYIGRRVVSPPGRYS-----FNEFDA 152
           QITTRLR H FRDAFS +NHP N       P F  Y+ RR  SPPG YS     F++FDA
Sbjct: 487 QITTRLRHHHFRDAFS-VNHPSNPAFTDQVPPFPPYLARREFSPPGMYSNLGPSFHKFDA 545

Query: 153 G--IPPHGGFRLHDERPPFVRNFHTPGFPHHMSERSPASAPWGPQGIARGEPGGPLGFPD 326
              + PHGGF  HD+R PF+ + H  G P H+ ER P+SAPWG QG+  G  G P+G  D
Sbjct: 546 VGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGHQGLIEG--GVPIGLAD 603

Query: 327 FAGVPQRRIEGFGGGH-QAVITSTTVEVVVPRSV 425
           FAG PQRRI GFGGG+ QA+ITSTTVEVVVPRS+
Sbjct: 604 FAGGPQRRIPGFGGGNQQAIITSTTVEVVVPRSL 637


>ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 679

 Score =  156 bits (395), Expect = 1e-36
 Identities = 84/149 (56%), Positives = 98/149 (65%), Gaps = 8/149 (5%)
 Frame = +3

Query: 3   QITTRLREHFFRDAFSSINHP-----LNHGPSFLSYIGRRVVSPPGRYSFNEFDA--GIP 161
           QITTRLR HFFRD F SI+HP     L+  P F  Y+GRR +SPP  ++F+ FD   G P
Sbjct: 475 QITTRLRNHFFRDVFPSIDHPSNPAFLDQAPPFPPYMGRRELSPPF-HAFHSFDGMGGPP 533

Query: 162 PHGGFRLHDERPPFVRNFHTPGFPHHMSERSPASAPWGPQGIARGEPGGPLGFPDFAGVP 341
           P  GF  HD+  PF+ N H PG P H   +     PWGPQG+   E GGP+G P+F G P
Sbjct: 534 PPVGFHPHDDHSPFMHNIHRPGMPPHFERK-----PWGPQGLM--EAGGPMGLPEFGGHP 586

Query: 342 QRRIEGFGG-GHQAVITSTTVEVVVPRSV 425
           QRRI GFGG  H A+ITSTTVEVVVPRSV
Sbjct: 587 QRRISGFGGVNHPAIITSTTVEVVVPRSV 615


>ref|XP_002302373.1| predicted protein [Populus trichocarpa] gi|222844099|gb|EEE81646.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  155 bits (393), Expect = 2e-36
 Identities = 81/149 (54%), Positives = 99/149 (66%), Gaps = 8/149 (5%)
 Frame = +3

Query: 3   QITTRLREHFFRDAFSSINHPLNHG-----PSFLSYIGRRVVSPPGRYSFNEFDA--GIP 161
           QITTRLR HFF++ F S++H  N       P F  Y+GR+ +SPP  +SF  FD   G P
Sbjct: 475 QITTRLRHHFFQNLFPSMDHLSNPAFLDQVPPFPPYMGRKELSPPF-HSFPNFDGMVGAP 533

Query: 162 PHGGFRLHDERPPFVRNFHTPGFPHHMSERSPASAPWGPQGIARGEPGGPLGFPDFAGVP 341
           PH  F  HD+ PPF+ N H PG P H++ER     PWGPQG   G  GGP+G PDFAG P
Sbjct: 534 PHVSFPPHDDHPPFMHNIHRPGMPPHIAERK----PWGPQGFVEG--GGPMGLPDFAGPP 587

Query: 342 QRRIEGFGG-GHQAVITSTTVEVVVPRSV 425
           QRRI GFGG  H A+ITSTT+EV+VPR++
Sbjct: 588 QRRISGFGGVSHPAIITSTTIEVIVPRTI 616


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