BLASTX nr result

ID: Atractylodes22_contig00042885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042885
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309625.1| AP2/ERF domain-containing transcription fact...   171   7e-41
ref|XP_002285107.1| PREDICTED: ethylene-responsive transcription...   170   1e-40
ref|XP_002324859.1| AP2/ERF domain-containing transcription fact...   169   2e-40
emb|CBI21039.3| unnamed protein product [Vitis vinifera]              169   3e-40
ref|XP_003526409.1| PREDICTED: ethylene-responsive transcription...   167   6e-40

>ref|XP_002309625.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222855601|gb|EEE93148.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 192

 Score =  171 bits (432), Expect = 7e-41
 Identities = 88/132 (66%), Positives = 99/132 (75%), Gaps = 7/132 (5%)
 Frame = -3

Query: 405 RGVRQRQWGSWVSEIRHPLLKRRIWLGTFDTXXXXXXXXXXXAILMNGQNAKTNFPVGN- 229
           RGVRQRQWGSWVSEIRHPLLKRR+WLGTF+T           AILMNGQNAKTNFP  + 
Sbjct: 8   RGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPASHL 67

Query: 228 --KTPPGSQNS---PAEIPADTLAAKLRKCC-KDPAPSVTCLRLDSDNSHIGVWQKRAGK 67
              T  G  N+   PA+  A+ L +KLRKCC KDP+PS+TCLRLD+DNSHIGVWQK+AG 
Sbjct: 68  DQDTKLGKDNNSPLPAKALAELLYSKLRKCCGKDPSPSLTCLRLDNDNSHIGVWQKKAGS 127

Query: 66  GSGSGWVMRVEL 31
            S S WVMRVEL
Sbjct: 128 CSSSNWVMRVEL 139


>ref|XP_002285107.1| PREDICTED: ethylene-responsive transcription factor SHINE 3-like
           [Vitis vinifera]
          Length = 194

 Score =  170 bits (430), Expect = 1e-40
 Identities = 89/137 (64%), Positives = 98/137 (71%), Gaps = 12/137 (8%)
 Frame = -3

Query: 405 RGVRQRQWGSWVSEIRHPLLKRRIWLGTFDTXXXXXXXXXXXAILMNGQNAKTNFPVGNK 226
           RGVRQRQWGSWVSEIRHPLLKRR+WLGTF++           AILMNGQNAKTNFPV  K
Sbjct: 9   RGVRQRQWGSWVSEIRHPLLKRRVWLGTFESAEAAARAYDQAAILMNGQNAKTNFPVV-K 67

Query: 225 TPPGSQNSPA------EIP------ADTLAAKLRKCCKDPAPSVTCLRLDSDNSHIGVWQ 82
              G   S A      E P      ++ L  KLRKCCKDP+PS+TCLRLD+DNSH+GVWQ
Sbjct: 68  NDQGEVKSSAGTDHEDESPLSRKALSEILTTKLRKCCKDPSPSLTCLRLDTDNSHLGVWQ 127

Query: 81  KRAGKGSGSGWVMRVEL 31
           KRAG  SGS WVMRVEL
Sbjct: 128 KRAGTRSGSSWVMRVEL 144


>ref|XP_002324859.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|118486668|gb|ABK95171.1| unknown
           [Populus trichocarpa] gi|222866293|gb|EEF03424.1|
           AP2/ERF domain-containing transcription factor [Populus
           trichocarpa]
          Length = 178

 Score =  169 bits (429), Expect = 2e-40
 Identities = 87/132 (65%), Positives = 99/132 (75%), Gaps = 7/132 (5%)
 Frame = -3

Query: 405 RGVRQRQWGSWVSEIRHPLLKRRIWLGTFDTXXXXXXXXXXXAILMNGQNAKTNFPVGN- 229
           RGVRQRQWGSWVSEIRHPLLKRR+WLGTF+T           AILMNGQNAKTNFP  + 
Sbjct: 8   RGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSHL 67

Query: 228 --KTPPGSQNS---PAEIPADTLAAKLRKCC-KDPAPSVTCLRLDSDNSHIGVWQKRAGK 67
              T  G  N+   PA+  A+ L +KLRKCC KDP+PS+TCLRLD+DNSHIGVWQK+AG 
Sbjct: 68  DQDTNLGKDNNSPLPAKALAELLNSKLRKCCGKDPSPSLTCLRLDNDNSHIGVWQKKAGS 127

Query: 66  GSGSGWVMRVEL 31
            S S WVM+VEL
Sbjct: 128 RSSSNWVMKVEL 139


>emb|CBI21039.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  169 bits (427), Expect = 3e-40
 Identities = 83/125 (66%), Positives = 92/125 (73%)
 Frame = -3

Query: 405 RGVRQRQWGSWVSEIRHPLLKRRIWLGTFDTXXXXXXXXXXXAILMNGQNAKTNFPVGNK 226
           RGVRQRQWGSWVSEIRHPLLKRR+WLGTF++           AILMNGQNAKTNFPV   
Sbjct: 9   RGVRQRQWGSWVSEIRHPLLKRRVWLGTFESAEAAARAYDQAAILMNGQNAKTNFPVAL- 67

Query: 225 TPPGSQNSPAEIPADTLAAKLRKCCKDPAPSVTCLRLDSDNSHIGVWQKRAGKGSGSGWV 46
                        ++ L  KLRKCCKDP+PS+TCLRLD+DNSH+GVWQKRAG  SGS WV
Sbjct: 68  -------------SEILTTKLRKCCKDPSPSLTCLRLDTDNSHLGVWQKRAGTRSGSSWV 114

Query: 45  MRVEL 31
           MRVEL
Sbjct: 115 MRVEL 119


>ref|XP_003526409.1| PREDICTED: ethylene-responsive transcription factor SHINE 3-like
           [Glycine max]
          Length = 185

 Score =  167 bits (424), Expect = 6e-40
 Identities = 85/132 (64%), Positives = 94/132 (71%), Gaps = 7/132 (5%)
 Frame = -3

Query: 405 RGVRQRQWGSWVSEIRHPLLKRRIWLGTFDTXXXXXXXXXXXAILMNGQNAKTNFPVGNK 226
           RGVRQRQWGSWVSEIRHPLLKRR+WLGTF+T           AILMNGQNAKTNFP    
Sbjct: 8   RGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKTNFPTSKN 67

Query: 225 TPPGSQN-------SPAEIPADTLAAKLRKCCKDPAPSVTCLRLDSDNSHIGVWQKRAGK 67
                 N       SP  + ++ L+ KLRK CKDPAPS+TCLRLD+DNSHIGVWQK AG 
Sbjct: 68  QAEADDNNNTDTFLSPKAL-SELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQKGAGP 126

Query: 66  GSGSGWVMRVEL 31
            SGS WVMR+EL
Sbjct: 127 HSGSNWVMRLEL 138


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