BLASTX nr result

ID: Atractylodes22_contig00042848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042848
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327310.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_003632093.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   122   3e-26
ref|XP_002530316.1| zinc finger protein, putative [Ricinus commu...   122   4e-26
ref|XP_002326038.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002326200.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002327310.1| predicted protein [Populus trichocarpa] gi|222835680|gb|EEE74115.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  124 bits (310), Expect = 1e-26
 Identities = 53/89 (59%), Positives = 62/89 (69%)
 Frame = -1

Query: 269 LVVNECGGGGNLKRCVCPNCKKPFCFRCKIPWHAGYSCEESGEMRDRNDIAFGVLSERNQ 90
           LV+NEC    NLK+  CPNCKK FCF CKIPWHAGY C ES  +RDRNDI  G L E  +
Sbjct: 125 LVLNECMD--NLKKIKCPNCKKNFCFLCKIPWHAGYRCNESRHLRDRNDILVGELIEEKR 182

Query: 89  WMRCPMCRHCVELVKGCTIVRCRCGIEFC 3
           W RC  C H VE V GC  ++C+CG++FC
Sbjct: 183 WTRCYNCGHSVERVSGCRDIKCKCGVQFC 211


>ref|XP_003632093.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase RNF144A-like [Vitis vinifera]
          Length = 212

 Score =  122 bits (306), Expect = 3e-26
 Identities = 52/88 (59%), Positives = 63/88 (71%)
 Frame = -1

Query: 269 LVVNECGGGGNLKRCVCPNCKKPFCFRCKIPWHAGYSCEESGEMRDRNDIAFGVLSERNQ 90
           L+VNECGG  N++R  CPNCKK FCF+CK PWH+GY C++  EMRD ND+ FG L E  +
Sbjct: 127 LIVNECGG--NVRRSKCPNCKKLFCFQCKSPWHSGYRCDKREEMRDVNDMLFGELVETKK 184

Query: 89  WMRCPMCRHCVELVKGCTIVRCRCGIEF 6
           W RCP C HCVELV+GC  V C+    F
Sbjct: 185 WSRCPSCGHCVELVEGCPNVSCKFVFSF 212


>ref|XP_002530316.1| zinc finger protein, putative [Ricinus communis]
           gi|223530172|gb|EEF32083.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 255

 Score =  122 bits (305), Expect = 4e-26
 Identities = 51/89 (57%), Positives = 61/89 (68%)
 Frame = -1

Query: 269 LVVNECGGGGNLKRCVCPNCKKPFCFRCKIPWHAGYSCEESGEMRDRNDIAFGVLSERNQ 90
           LV+NEC     LK+  CPNCKK  C+ CKIPWHAGY C ESG++RDRND+  G L E  +
Sbjct: 125 LVLNECKD--KLKKIKCPNCKKNLCYVCKIPWHAGYQCNESGQLRDRNDVLIGELIEEKK 182

Query: 89  WMRCPMCRHCVELVKGCTIVRCRCGIEFC 3
           W RC  C H VE V GC  V+C+CG+ FC
Sbjct: 183 WTRCYNCGHSVERVSGCRDVKCKCGVRFC 211


>ref|XP_002326038.1| predicted protein [Populus trichocarpa] gi|222862913|gb|EEF00420.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  119 bits (298), Expect = 3e-25
 Identities = 52/89 (58%), Positives = 58/89 (65%)
 Frame = -1

Query: 269 LVVNECGGGGNLKRCVCPNCKKPFCFRCKIPWHAGYSCEESGEMRDRNDIAFGVLSERNQ 90
           LV+NEC     LK+  CPNCKK FCF CKIPWH GY C ES  +RDRNDI  G L E  +
Sbjct: 125 LVLNECKD--KLKKINCPNCKKNFCFLCKIPWHTGYRCSESRHLRDRNDILAGELIEEKK 182

Query: 89  WMRCPMCRHCVELVKGCTIVRCRCGIEFC 3
           W RC  C H VE V GC  ++CRCG  FC
Sbjct: 183 WTRCYNCSHSVERVSGCRDIKCRCGFRFC 211


>ref|XP_002326200.1| predicted protein [Populus trichocarpa] gi|222833393|gb|EEE71870.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/89 (57%), Positives = 59/89 (66%)
 Frame = -1

Query: 269 LVVNECGGGGNLKRCVCPNCKKPFCFRCKIPWHAGYSCEESGEMRDRNDIAFGVLSERNQ 90
           LV+NEC     L +  CPNCKK FCF CKIPWHAGY C ES  +RDRNDI  G L E  +
Sbjct: 104 LVLNECRD--KLTKIKCPNCKKSFCFLCKIPWHAGYQCNESRHLRDRNDILVGELIEEKK 161

Query: 89  WMRCPMCRHCVELVKGCTIVRCRCGIEFC 3
           W RC  C H VE V GC  ++C+CG+ FC
Sbjct: 162 WTRCYNCGHSVERVSGCRDMKCKCGVRFC 190


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