BLASTX nr result

ID: Atractylodes22_contig00042828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042828
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...   163   1e-38
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi...   161   4e-38
ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containi...   161   4e-38
ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38

>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score =  179 bits (454), Expect = 2e-43
 Identities = 99/172 (57%), Positives = 120/172 (69%), Gaps = 5/172 (2%)
 Frame = +1

Query: 1   PHLALRFFLFTIEYSLCHHSLLSYATIIHTLARSRQKSHALTLIQSAIRKFHDAXXXXXX 180
           PHLAL FFL+    SLC+H+LLSY+TIIH LAR+R KS AL LI++AIR F D+      
Sbjct: 80  PHLALSFFLWCHHKSLCNHTLLSYSTIIHILARARLKSQALGLIRTAIRVFDDSDECSSQ 139

Query: 181 XXXXXIFGTLIKTYRTCDSAPFVFDLLIKACLQSKRINQGIQIVRMLRSKGIYPMISTCN 360
                IF +L+KTY +C SAPFVFDLLIKACL SKRI Q I IV+MLRS+GI P ISTCN
Sbjct: 140 PPK--IFESLVKTYNSCGSAPFVFDLLIKACLNSKRIEQSISIVKMLRSRGISPTISTCN 197

Query: 361 SLIMSVSKHHGSVAGYEIYNELLGSGGEFRDKNV-----VGFKVVPNVHTYN 501
           +LI  VS+  G  AGYEIY E+ GS  +  ++ V     V  +V PNVHT+N
Sbjct: 198 ALIWQVSRGRGCDAGYEIYREVFGSWDDEINEKVRVRVRVRVRVCPNVHTFN 249


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score =  163 bits (413), Expect = 1e-38
 Identities = 92/171 (53%), Positives = 110/171 (64%), Gaps = 4/171 (2%)
 Frame = +1

Query: 1   PHLALRFFLFTIEYSLCHHSLLSYATIIHTLARSRQKSHALTLIQSAIRKFH--DAXXXX 174
           P LALRFFL+T   SLC+H+L SY++IIH LAR+R  SHA  LI++AIR  H  D     
Sbjct: 78  PQLALRFFLWTKSKSLCNHNLASYSSIIHLLARARLSSHAYDLIRTAIRASHQNDEENCR 137

Query: 175 XXXXXXXIFGTLIKTYRTCDSAPFVFDLLIKACLQSKRINQGIQIVRMLRSKGIYPMIST 354
                  +F TL+KTYR   SAPFVFDLLIKACL SK+++  I+IVRML S+GI P +ST
Sbjct: 138 FNSRPLNLFETLVKTYRDSGSAPFVFDLLIKACLDSKKLDPSIEIVRMLLSRGISPKVST 197

Query: 355 CNSLIMSVSKHHGSVAGYEIYNELLGSGGEFRD--KNVVGFKVVPNVHTYN 501
            NSLI  V K  G   GY IY E      E  +  K   GF+V PNVHTYN
Sbjct: 198 LNSLISRVCKSRGVDEGYAIYREFFRLDEENNEISKRGSGFRVTPNVHTYN 248


>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score =  161 bits (408), Expect = 4e-38
 Identities = 87/175 (49%), Positives = 117/175 (66%), Gaps = 8/175 (4%)
 Frame = +1

Query: 1   PHLALRFFLFTIEYSLCHHSLLSYATIIHTLARSRQKSHALTLIQSAIRKF-------HD 159
           PHLALRFFL+T   SLC+H+L+SY+T+IH LAR R ++HA  +IQ+AIR         + 
Sbjct: 86  PHLALRFFLWTQNKSLCNHNLISYSTLIHILARGRLRTHAKDVIQTAIRAAQLEDSDNYS 145

Query: 160 AXXXXXXXXXXXIFGTLIKTYRTCDSAPFVFDLLIKACLQSKRINQGIQIVRMLRSKGIY 339
                       +F TL+KTY+ C SAPFVFDLLIKA L SK+++  I+IVRMLRS+GI 
Sbjct: 146 KTERFSPSRPLKLFETLVKTYKRCGSAPFVFDLLIKALLDSKKLDSSIEIVRMLRSRGIS 205

Query: 340 PMISTCNSLIMSVSKHHGSVAGYEIYNELLGSGGEFRDKNV-VGFKVVPNVHTYN 501
           P +ST NSLI+ VSK  G+   Y I+ E+ G   E  +++V +  +V PNVHT+N
Sbjct: 206 PQVSTLNSLILLVSKCQGANVAYAIFREVFGLDCEIEEEHVKLKGRVSPNVHTFN 260


>ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
           gi|449472579|ref|XP_004153637.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score =  161 bits (408), Expect = 4e-38
 Identities = 87/175 (49%), Positives = 117/175 (66%), Gaps = 8/175 (4%)
 Frame = +1

Query: 1   PHLALRFFLFTIEYSLCHHSLLSYATIIHTLARSRQKSHALTLIQSAIRKF-------HD 159
           PHLALRFFL+T   SLC+H+L+SY+T+IH LAR R ++HA  +IQ+AIR         + 
Sbjct: 86  PHLALRFFLWTQNKSLCNHNLISYSTLIHILARGRLRTHAKDVIQTAIRAAQLEDSDNYS 145

Query: 160 AXXXXXXXXXXXIFGTLIKTYRTCDSAPFVFDLLIKACLQSKRINQGIQIVRMLRSKGIY 339
                       +F TL+KTY+ C SAPFVFDLLIKA L SK+++  I+IVRMLRS+GI 
Sbjct: 146 KTERFSPSRPLKLFETLVKTYKRCGSAPFVFDLLIKALLDSKKLDSSIEIVRMLRSRGIS 205

Query: 340 PMISTCNSLIMSVSKHHGSVAGYEIYNELLGSGGEFRDKNV-VGFKVVPNVHTYN 501
           P +ST NSLI+ VSK  G+   Y I+ E+ G   E  +++V +  +V PNVHT+N
Sbjct: 206 PQVSTLNSLILLVSKCQGANVAYAIFREVFGLDCEIEEEHVKLKGRVSPNVHTFN 260


>ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  160 bits (406), Expect = 8e-38
 Identities = 87/169 (51%), Positives = 114/169 (67%), Gaps = 2/169 (1%)
 Frame = +1

Query: 1   PHLALRFFLFTIEYS-LCHHSLLSYATIIHTLARSRQKSHALTLIQSAIRKFHDAXXXXX 177
           PHLAL FF FT+  S LC H+L SYATIIH L+R+R K+HA  +I++ +R    +     
Sbjct: 87  PHLALSFFHFTLHNSSLCSHNLRSYATIIHILSRARLKAHAQEIIRAGLR----SQILYH 142

Query: 178 XXXXXXIFGTLIKTYRTCDSAPFVFDLLIKACLQSKRINQGIQIVRMLRSKGIYPMISTC 357
                  F  L+K+YR CDSAPFVFDLLIK+CL+ K+I+  I+IV+MLRSKGI P ISTC
Sbjct: 143 LLKEVRFFEVLVKSYRECDSAPFVFDLLIKSCLELKKIDGSIEIVKMLRSKGISPSISTC 202

Query: 358 NSLIMSVSKHHGSVAGYEIYNELLG-SGGEFRDKNVVGFKVVPNVHTYN 501
           N+LI  VS+  GS  GY ++ E+ G    E  +K   GF+V PNVH++N
Sbjct: 203 NALISEVSRCKGSFVGYGVFKEVFGLESCELGEKMRRGFRVRPNVHSFN 251


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