BLASTX nr result

ID: Atractylodes22_contig00042793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042793
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA20426.1| A-type cyclin [Nicotiana tabacum]                     148   4e-34
ref|XP_002527469.1| cyclin A, putative [Ricinus communis] gi|223...   148   4e-34
dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]                   147   7e-34
ref|NP_001234787.1| cyclin A3 [Solanum lycopersicum] gi|5420278|...   147   7e-34
emb|CAA63540.1| cyclin A-like protein [Nicotiana tabacum]             147   7e-34

>dbj|BAA20426.1| A-type cyclin [Nicotiana tabacum]
          Length = 371

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/122 (59%), Positives = 87/122 (71%)
 Frame = +2

Query: 2   LFLTVSYIDRFLSSHSLSRNKLQLLGVSTMLLASKFEEISPPHVEDYCYITDNTYTKQEV 181
           L+LTV+++DRFLSSH ++RN LQLLGVS ML+ASK+EEISPPHVED+CYITDNTYT +EV
Sbjct: 161 LYLTVTFVDRFLSSHVMARNSLQLLGVSCMLVASKYEEISPPHVEDFCYITDNTYTGEEV 220

Query: 182 VQMESDLLKFLNFEVSNPTPKTFLRILIRAVQGDXXXXXXXXXXXXXXXXXXXXXDYSCL 361
           V ME DLL FLNFE+SNPT KTFLRI  +  Q +                     DYSC+
Sbjct: 221 VNMERDLLNFLNFEISNPTTKTFLRIFTKVSQDNVDFLTLHFEFLGCYLAELSLLDYSCV 280

Query: 362 GF 367
            F
Sbjct: 281 RF 282


>ref|XP_002527469.1| cyclin A, putative [Ricinus communis] gi|223533109|gb|EEF34867.1|
           cyclin A, putative [Ricinus communis]
          Length = 387

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/92 (77%), Positives = 82/92 (89%)
 Frame = +2

Query: 2   LFLTVSYIDRFLSSHSLSRNKLQLLGVSTMLLASKFEEISPPHVEDYCYITDNTYTKQEV 181
           L+LTVSYIDRFLSS +L RNKLQLLGVS ML+ASK+EEISPPHVED+CYITDNTY+K+EV
Sbjct: 185 LYLTVSYIDRFLSSRALGRNKLQLLGVSCMLIASKYEEISPPHVEDFCYITDNTYSKEEV 244

Query: 182 VQMESDLLKFLNFEVSNPTPKTFLRILIRAVQ 277
           V ME D+LKFLN+E+S PT K FLRIL +A Q
Sbjct: 245 VDMEKDVLKFLNYEMSTPTAKNFLRILTKAAQ 276


>dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]
          Length = 306

 Score =  147 bits (372), Expect = 7e-34
 Identities = 75/122 (61%), Positives = 88/122 (72%)
 Frame = +2

Query: 2   LFLTVSYIDRFLSSHSLSRNKLQLLGVSTMLLASKFEEISPPHVEDYCYITDNTYTKQEV 181
           L+LTVSYIDRFLS ++LSR KLQLLGVS+ML+ASK+EEISPPHVED+CYITDNTY K+EV
Sbjct: 161 LYLTVSYIDRFLSMNALSRQKLQLLGVSSMLIASKYEEISPPHVEDFCYITDNTYKKEEV 220

Query: 182 VQMESDLLKFLNFEVSNPTPKTFLRILIRAVQGDXXXXXXXXXXXXXXXXXXXXXDYSCL 361
           V+ME+D+LKFL FE+ NPT KTFLR L R VQ                       DY C+
Sbjct: 221 VKMEADVLKFLKFEMGNPTIKTFLRRLTRVVQDGDKNPNLQFEFLGYYLAELSLLDYGCV 280

Query: 362 GF 367
            F
Sbjct: 281 KF 282


>ref|NP_001234787.1| cyclin A3 [Solanum lycopersicum] gi|5420278|emb|CAB46643.1| cyclin
           A3 [Solanum lycopersicum]
          Length = 378

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/122 (60%), Positives = 87/122 (71%)
 Frame = +2

Query: 2   LFLTVSYIDRFLSSHSLSRNKLQLLGVSTMLLASKFEEISPPHVEDYCYITDNTYTKQEV 181
           L+L VSYIDRFLSSH L+  KLQLLGVS ML+ASK+EEISPPHVED+CYITDNTYT++EV
Sbjct: 168 LYLAVSYIDRFLSSHVLAMEKLQLLGVSCMLVASKYEEISPPHVEDFCYITDNTYTREEV 227

Query: 182 VQMESDLLKFLNFEVSNPTPKTFLRILIRAVQGDXXXXXXXXXXXXXXXXXXXXXDYSCL 361
           V ME DLL FLNFE+S+PT  TFLRI ++A Q +                     DYSC+
Sbjct: 228 VNMERDLLSFLNFEISSPTTITFLRIFLKAAQDNLSFLTLQFEFLSCYLAELSLLDYSCV 287

Query: 362 GF 367
            F
Sbjct: 288 RF 289


>emb|CAA63540.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 371

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/122 (60%), Positives = 87/122 (71%)
 Frame = +2

Query: 2   LFLTVSYIDRFLSSHSLSRNKLQLLGVSTMLLASKFEEISPPHVEDYCYITDNTYTKQEV 181
           L+LTV++IDRFLSSH L+RN LQLLGVS ML ASK+EEISPPHVED+CYITDNTYT +EV
Sbjct: 161 LYLTVTFIDRFLSSHVLARNSLQLLGVSCMLAASKYEEISPPHVEDFCYITDNTYTGEEV 220

Query: 182 VQMESDLLKFLNFEVSNPTPKTFLRILIRAVQGDXXXXXXXXXXXXXXXXXXXXXDYSCL 361
           V ME +LL FL+FE+SNPT KTFLRI  +A Q +                     DYSC+
Sbjct: 221 VNMERELLNFLDFEISNPTTKTFLRIFTKAAQDNVDFLTLHFEFLGCYLTELSLLDYSCV 280

Query: 362 GF 367
            F
Sbjct: 281 QF 282


Top