BLASTX nr result

ID: Atractylodes22_contig00042657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042657
         (826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   318   9e-85
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   316   3e-84
emb|CBI33811.3| unnamed protein product [Vitis vinifera]              316   3e-84
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...   303   4e-80
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...   303   4e-80

>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 443

 Score =  318 bits (815), Expect = 9e-85
 Identities = 154/227 (67%), Positives = 183/227 (80%), Gaps = 2/227 (0%)
 Frame = -3

Query: 677 ETKQYFHYNHTDSCKFSRWTSRESYVFMYARPWQNVVNFYSNVVNGQTTLLQLLGAKTHH 498
           + K YFHYNHTDSCK  RWT+RES+ FMYARPWQ V +FYSNVVNG+ + L+L  ++ H 
Sbjct: 30  QNKIYFHYNHTDSCKSFRWTARESFQFMYARPWQEVSDFYSNVVNGRLSFLELFRSQMHF 89

Query: 497 VPDDAGI-EPCDESEVVTPSQK-RAGRWARANFKIVLSYHGGSFDGWQKQPGLNTVQEVI 324
           V DDA I E  +++E+   S + R GRWAR NFKI LSYHGGSFDGWQKQPGLNTVQ ++
Sbjct: 90  VRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTVQGLV 149

Query: 323 EKSLGKFVDERKAALLRDKDLPLEGTVVVAGRTDKGVTGFQQVCSFYTWREDVRTQDIEG 144
           EKSLGKFVDE+KA  L++   PLEG  VVAGRTDKGV+  +QVCSFYTWR+DVR  +IE 
Sbjct: 150 EKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVRPHEIED 209

Query: 143 AINSTVPGKLRVISVSQVPRTFHPNFSAKWRRYLYIFPLNDGEAGKE 3
           AINS+ PGK+RVISVS+V R FHPNFSAKWRRYLYIFP+NDGE  ++
Sbjct: 210 AINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQ 256


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  316 bits (810), Expect = 3e-84
 Identities = 151/226 (66%), Positives = 176/226 (77%), Gaps = 1/226 (0%)
 Frame = -3

Query: 677 ETKQYFHYNHTDSCKFSRWTSRESYVFMYARPWQNVVNFYSNVVNGQTTLLQLLGAKTHH 498
           E K Y HY HT   KFSRWT+RES+ FMY RPWQ V++FYSNVV G+ +LL LLG +TH 
Sbjct: 19  ENKVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLLGLLGIETHP 78

Query: 497 VPDDAGIEPCDESEVVTPSQK-RAGRWARANFKIVLSYHGGSFDGWQKQPGLNTVQEVIE 321
           + D   +E  D++E      K R GRWAR  FKIVLSYHG SFDGWQKQPGLNTVQ ++E
Sbjct: 79  IHDGEIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVE 138

Query: 320 KSLGKFVDERKAALLRDKDLPLEGTVVVAGRTDKGVTGFQQVCSFYTWREDVRTQDIEGA 141
            SLG+FVDERKA  L++K+LP+EG V VAGRTDKGVT  QQVCSFYTW++DV+ QDIE A
Sbjct: 139 ASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDA 198

Query: 140 INSTVPGKLRVISVSQVPRTFHPNFSAKWRRYLYIFPLNDGEAGKE 3
           IN   PGKLRVISVS+V R FHPNFSAKWR Y YIFPLNDG+ G++
Sbjct: 199 INGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQ 244


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  316 bits (810), Expect = 3e-84
 Identities = 151/226 (66%), Positives = 176/226 (77%), Gaps = 1/226 (0%)
 Frame = -3

Query: 677 ETKQYFHYNHTDSCKFSRWTSRESYVFMYARPWQNVVNFYSNVVNGQTTLLQLLGAKTHH 498
           E K Y HY HT   KFSRWT+RES+ FMY RPWQ V++FYSNVV G+ +LL LLG +TH 
Sbjct: 19  ENKVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLLGLLGIETHP 78

Query: 497 VPDDAGIEPCDESEVVTPSQK-RAGRWARANFKIVLSYHGGSFDGWQKQPGLNTVQEVIE 321
           + D   +E  D++E      K R GRWAR  FKIVLSYHG SFDGWQKQPGLNTVQ ++E
Sbjct: 79  IHDGEIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVE 138

Query: 320 KSLGKFVDERKAALLRDKDLPLEGTVVVAGRTDKGVTGFQQVCSFYTWREDVRTQDIEGA 141
            SLG+FVDERKA  L++K+LP+EG V VAGRTDKGVT  QQVCSFYTW++DV+ QDIE A
Sbjct: 139 ASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVKVQDIEDA 198

Query: 140 INSTVPGKLRVISVSQVPRTFHPNFSAKWRRYLYIFPLNDGEAGKE 3
           IN   PGKLRVISVS+V R FHPNFSAKWR Y YIFPLNDG+ G++
Sbjct: 199 INGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQ 244


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  303 bits (775), Expect = 4e-80
 Identities = 146/223 (65%), Positives = 170/223 (76%), Gaps = 2/223 (0%)
 Frame = -3

Query: 677 ETKQYFHYNHTDSCKFSRWTSRESYVFMYARPWQNVVNFYSNVVNGQTTLLQLLGAKTHH 498
           + K Y HYNHTD C+ +RWT+RESY FMY RPWQ V++FYS+ VNG+ +L  LLG +   
Sbjct: 28  QRKDYLHYNHTDRCRSARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLGTEICR 87

Query: 497 VPDDAGIEPCDESEVVTPS--QKRAGRWARANFKIVLSYHGGSFDGWQKQPGLNTVQEVI 324
             DDA       S  +  +  + + GRWARA FKIVLSY G SFDGWQKQPGLNTVQ ++
Sbjct: 88  DHDDAETPLIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLV 147

Query: 323 EKSLGKFVDERKAALLRDKDLPLEGTVVVAGRTDKGVTGFQQVCSFYTWREDVRTQDIEG 144
           E+SLGKFVDE+KA +L+DK LPLEG  +VAGRTDKGVT  +QVCSFYTWR DV+ QDIE 
Sbjct: 148 ERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIED 207

Query: 143 AINSTVPGKLRVISVSQVPRTFHPNFSAKWRRYLYIFPLNDGE 15
           +INS  PGKLR  SVSQV R FHPNFSAKWRRYLYI PLNDGE
Sbjct: 208 SINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGE 250


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  303 bits (775), Expect = 4e-80
 Identities = 146/223 (65%), Positives = 170/223 (76%), Gaps = 2/223 (0%)
 Frame = -3

Query: 677 ETKQYFHYNHTDSCKFSRWTSRESYVFMYARPWQNVVNFYSNVVNGQTTLLQLLGAKTHH 498
           + K Y HYNHTD C+ +RWT+RESY FMY RPWQ V++FYS+ VNG+ +L  LLG +   
Sbjct: 28  QRKDYLHYNHTDRCRSARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSSLLGTEICR 87

Query: 497 VPDDAGIEPCDESEVVTPS--QKRAGRWARANFKIVLSYHGGSFDGWQKQPGLNTVQEVI 324
             DDA       S  +  +  + + GRWARA FKIVLSY G SFDGWQKQPGLNTVQ ++
Sbjct: 88  DHDDAETPLIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLV 147

Query: 323 EKSLGKFVDERKAALLRDKDLPLEGTVVVAGRTDKGVTGFQQVCSFYTWREDVRTQDIEG 144
           E+SLGKFVDE+KA +L+DK LPLEG  +VAGRTDKGVT  +QVCSFYTWR DV+ QDIE 
Sbjct: 148 ERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVKPQDIED 207

Query: 143 AINSTVPGKLRVISVSQVPRTFHPNFSAKWRRYLYIFPLNDGE 15
           +INS  PGKLR  SVSQV R FHPNFSAKWRRYLYI PLNDGE
Sbjct: 208 SINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGE 250


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