BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042619
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     213   5e-53
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   191   2e-46
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   189   5e-46
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        189   9e-46
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   188   2e-45

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  213 bits (542), Expect = 5e-53
 Identities = 110/282 (39%), Positives = 161/282 (57%), Gaps = 4/282 (1%)
 Frame = -3

Query: 873 MSTSSTPP-FTLRSFFEKEKLNGTNYLDWLRNLRIVLRYESKEYVIDTPIPAEPRANASQ 697
           M+ ++TP  F LRS  EKEKLNGTN++DW RNLRIVL+ E KEYV++ P P E   NA+ 
Sbjct: 1   MAANTTPSTFNLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELPNNATA 60

Query: 696 AVKDAYEKHKRESTEVACLMLSTMTPQLQKSLDRHGAFEICNQLKDMFQQQAAQERFQTM 517
             +  +EKH  ++ +++CLML+TM+P+LQK  +   A      L+ MF+ QA  ERF T 
Sbjct: 61  TARRGFEKHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFENQARDERFNTS 120

Query: 516 RSLLTTRLKEGEGVSKHVLNLKMYVDQLERLGLTVQKEMVANIVLGSLTPAYEQFIMNYN 337
           +SL   RL EG  VS HV+ +  Y++ LE+LG  + +E+  +++L SL P++E FI+NY+
Sbjct: 121 KSLFACRLVEGNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYH 180

Query: 336 MHAMDKTIMELHGMLKNVEENMSL---HKPSTSSAAPVLAIKEXXXXXXXXXXXXXXXXX 166
           M+ MD+T+ ELHGMLK VEE++     H     +A     +K+                 
Sbjct: 181 MNNMDRTLAELHGMLKTVEESIQKNGHHVMMMQNAKRKPPVKKLCTKRKLTPDEIASASN 240

Query: 165 XXXXXXXXXXXXXXXXXXANPEDATCYHCGEKGHWRNTCRKF 40
                                 DA C++C E GHW+  C+K+
Sbjct: 241 AKKGKKGSA-----------ASDAVCFYCKETGHWKRNCKKY 271


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  191 bits (484), Expect = 2e-46
 Identities = 100/273 (36%), Positives = 149/273 (54%)
 Frame = -3

Query: 858 TPPFTLRSFFEKEKLNGTNYLDWLRNLRIVLRYESKEYVIDTPIPAEPRANASQAVKDAY 679
           T  F LRS  EKEKLNGTN+ DW RNLRIVLR + KE+V++ PIP  P  NA+ A+K AY
Sbjct: 10  TSSFALRSILEKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPTENAAAAIKTAY 69

Query: 678 EKHKRESTEVACLMLSTMTPQLQKSLDRHGAFEICNQLKDMFQQQAAQERFQTMRSLLTT 499
           +K   ES +V+CLML+ M   LQK  +   A+++   LK MF+ QA  ERF+  ++L   
Sbjct: 70  KKACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTERFEISKNLFGC 129

Query: 498 RLKEGEGVSKHVLNLKMYVDQLERLGLTVQKEMVANIVLGSLTPAYEQFIMNYNMHAMDK 319
           +L EG  VS HV+ +  Y   LE+LG  + +E+  +++L SL  +Y QFI+N++M+ +DK
Sbjct: 130 KLAEGGPVSPHVIKMVGYTQSLEKLGFPLSQELATDLILASLPESYGQFILNFHMNGLDK 189

Query: 318 TIMELHGMLKNVEENMSLHKPSTSSAAPVLAIKEXXXXXXXXXXXXXXXXXXXXXXXXXX 139
            + ELH MLK  E ++            V+ +++                          
Sbjct: 190 NLTELHMMLKTAEGSVK------KCNNHVIMVQKSTSFKKKAKTWIKKKGKAKVSDKIQT 243

Query: 138 XXXXXXXXXANPEDATCYHCGEKGHWRNTCRKF 40
                       ++  C++C E GHW+  C+K+
Sbjct: 244 DKPKTKTKSGPTQENECFYCKELGHWKRNCKKY 276


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  189 bits (481), Expect = 5e-46
 Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 10/288 (3%)
 Frame = -3

Query: 873 MSTSSTPPFTLRSFFEKEKLNGTNYLDWLRNLRIVLRYESKEYVIDTPIPAEPRANASQA 694
           M+  +   F LRS  EKEKL GTN +DW RNLRIVLR E KE+V+  P PA+   NA  A
Sbjct: 1   MAAPAPSSFNLRSILEKEKLTGTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAA 60

Query: 693 VKDAYEKHKRESTEVACLMLSTMTPQLQKSLDRHGAFEICNQLKDMFQQQAAQERFQTMR 514
            +  +EK   +  +++CLML+TM+P+LQ+  +   A  I   L++MF+ QA  +RF T +
Sbjct: 61  QRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAKRFNTSK 120

Query: 513 SLLTTRLKEGEGVSKHVLNLKMYVDQLERLGLTVQKEMVANIVLGSLTPAYEQFIMNYNM 334
           SL   RL EG  VS HV+ +  Y + LE+LG  + +E+  +++L SL P++E FI+N+NM
Sbjct: 121 SLFACRLAEGNPVSPHVIKMIGYNETLEKLGFPLSQELATDLILQSLPPSFEPFILNFNM 180

Query: 333 HAMDKTIMELHGMLKNVEEN----------MSLHKPSTSSAAPVLAIKEXXXXXXXXXXX 184
           + M++T+ +L GMLK  EE+          M   KP+   + P                 
Sbjct: 181 NNMNRTLTKLPGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGPA---------------- 224

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXANPEDATCYHCGEKGHWRNTCRKF 40
                                      +DA C+ C E GHW+  C+K+
Sbjct: 225 ---------------------------KDAECFFCKEAGHWKRNCKKY 245


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  189 bits (479), Expect = 9e-46
 Identities = 99/278 (35%), Positives = 154/278 (55%)
 Frame = -3

Query: 873 MSTSSTPPFTLRSFFEKEKLNGTNYLDWLRNLRIVLRYESKEYVIDTPIPAEPRANASQA 694
           M+  +   F LRS  EKEKL GTN++DW RNLRIVLR E KE+++  P PA+   NA  A
Sbjct: 78  MAAHAPSNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFLLIQPFPADLPNNAPAA 137

Query: 693 VKDAYEKHKRESTEVACLMLSTMTPQLQKSLDRHGAFEICNQLKDMFQQQAAQERFQTMR 514
            +  +E+   +  +++CLML+TM+P+LQ   +   A  I   L++MF+ QA  ERF T +
Sbjct: 138 QRRKHERRCNDYLDISCLMLATMSPELQSQYEALDAHTIITGLRNMFEDQARAERFNTSK 197

Query: 513 SLLTTRLKEGEGVSKHVLNLKMYVDQLERLGLTVQKEMVANIVLGSLTPAYEQFIMNYNM 334
            L   RL +G  VS HV+ +  Y + L++LG  + +E+  +++L SL P++E FIMN+NM
Sbjct: 198 FLFAYRLAQGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNM 257

Query: 333 HAMDKTIMELHGMLKNVEENMSLHKPSTSSAAPVLAIKEXXXXXXXXXXXXXXXXXXXXX 154
           + +++T+ ELHGMLK  EE++   K +++    +  +K                      
Sbjct: 258 NNLNRTLAELHGMLKTAEESI---KKNSNYVMVMHKLKPNNKKSGQKRKLNSDEITSTSN 314

Query: 153 XXXXXXXXXXXXXXANPEDATCYHCGEKGHWRNTCRKF 40
                            +DA C+ C E GHW+  C+K+
Sbjct: 315 CKTKVQKTGP------AKDAECFFCKETGHWKRNCKKY 346


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  188 bits (477), Expect = 2e-45
 Identities = 101/272 (37%), Positives = 151/272 (55%)
 Frame = -3

Query: 873 MSTSSTPPFTLRSFFEKEKLNGTNYLDWLRNLRIVLRYESKEYVIDTPIPAEPRANASQA 694
           M+  +   F LRS  EKEKL GTN++DW RNLRIVLR E KE+V+  P PA    NA  A
Sbjct: 68  MAAPAPSNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAA 127

Query: 693 VKDAYEKHKRESTEVACLMLSTMTPQLQKSLDRHGAFEICNQLKDMFQQQAAQERFQTMR 514
            +  +EK   +  +++CLML+TM+P+LQ+  +   A  I   L++MF+ QA  ERF T +
Sbjct: 128 QRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSK 187

Query: 513 SLLTTRLKEGEGVSKHVLNLKMYVDQLERLGLTVQKEMVANIVLGSLTPAYEQFIMNYNM 334
           SL   RL EG  VS HV+ +  Y + L++LG  + +E+  +++L SL P++E FIMN+NM
Sbjct: 188 SLFACRLAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNM 247

Query: 333 HAMDKTIMELHGMLKNVEENMSLHKPSTSSAAPVLAIKEXXXXXXXXXXXXXXXXXXXXX 154
           + +++T+ ELHGMLK  EE++       S+   V+  ++                     
Sbjct: 248 NNLNRTLAELHGMLKTAEESIK----KNSNHVMVMHKRK-----PNNKKSGQKRKLNSDE 298

Query: 153 XXXXXXXXXXXXXXANPEDATCYHCGEKGHWR 58
                          + +DA C+ C E GHW+
Sbjct: 299 ITSTSNSKTKVQKTGSAKDAECFFCKETGHWK 330