BLASTX nr result

ID: Atractylodes22_contig00042476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042476
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]    88   6e-16
gb|AAB82754.1| retrofit [Oryza longistaminata]                         87   1e-15
emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]         86   2e-15
gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subc...    86   4e-15
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                   86   4e-15

>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
          Length = 478

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/80 (50%), Positives = 57/80 (71%)
 Frame = +2

Query: 2   LSYFLGIEVVRRDSDIILSQRKYINELLARANLSHSKPVPSPCTTSANLSLGDSAPFDDP 181
           L+YFLG+EV    + + LSQRKYI +LL R +++ +KP P+P  TS  L+L    P  DP
Sbjct: 184 LTYFLGVEVTSHTNGLFLSQRKYIADLLNRTHMTEAKPAPTPLATSPILTLQSGTPLSDP 243

Query: 182 VKYRQLVGALQYVTLSRPDI 241
            +YR +VG+LQY++L+RPDI
Sbjct: 244 TEYRTVVGSLQYLSLTRPDI 263


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/82 (51%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2    LSYFLGIEVVRRDSDIILSQRKYINELLARANLSHSKPVPSPCTTSANLSLGDSAPF--D 175
            L YFLGIEV +  + +IL+Q KY N+LL R N+S+ KPV +P + S  L+L + +P   +
Sbjct: 1163 LHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPN 1222

Query: 176  DPVKYRQLVGALQYVTLSRPDI 241
            D ++YR +VGALQY+TL+RPDI
Sbjct: 1223 DAIQYRSIVGALQYLTLTRPDI 1244


>emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]
          Length = 950

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   LSYFLGIEVVRRDSDIILSQRKYINELLARANLSHSKPVPSPCTTSANLSLGDSAPF--D 175
           L YFLGIEV +  + IIL+Q KY N+LL R N+S+ KPV +P + S  L+L + +P   +
Sbjct: 231 LHYFLGIEVTKVSNGIILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPN 290

Query: 176 DPVKYRQLVGALQYVTLSRPDI 241
           D  +YR +VGALQY+TL+RPDI
Sbjct: 291 DATQYRSIVGALQYLTLTRPDI 312


>gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 825

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   LSYFLGIEVVRRDSDIILSQRKYINELLARANLSHSKPVPSPCTTSANLSLGDSAPF--D 175
           L YFLGIEV +  + I+L+Q KY N+LL R N+S+ KPV +P + S  L+L + +P   +
Sbjct: 644 LHYFLGIEVTKVSNGILLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPN 703

Query: 176 DPVKYRQLVGALQYVTLSRPDI 241
           D  +YR +VGALQY+TL+RPDI
Sbjct: 704 DATQYRSIVGALQYLTLTRPDI 725


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2    LSYFLGIEVVRRDSDIILSQRKYINELLARANLSHSKPVPSPCTTSANLSLGDSAPF--D 175
            L YFLGIEV +  + I+L+Q KY N+LL R N+S+ KPV +P + S  L+L + +P   +
Sbjct: 1154 LHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPN 1213

Query: 176  DPVKYRQLVGALQYVTLSRPDI 241
            D  +YR +VGALQY+TL+RPDI
Sbjct: 1214 DATQYRSIVGALQYLTLTRPDI 1235


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