BLASTX nr result

ID: Atractylodes22_contig00042334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042334
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    62   6e-08
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    62   6e-08
ref|XP_004172376.1| PREDICTED: uncharacterized protein LOC101223...    55   4e-06

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/61 (40%), Positives = 47/61 (77%)
 Frame = +3

Query: 6   TVEDYQRNFIKLMSPLTNVPEDIVLSNFINGLKGEIKVDLPLMDPRNLEEAMELAIKVEG 185
           +V +Y+R F++  +PL  +PE+I++  FI+GL  E++ ++ +++P NL++AMELA+K+E 
Sbjct: 267 SVWEYRRKFVETAAPLDGIPEEILMGKFIHGLNPELQSEIRVLNPYNLDQAMELALKLEE 326

Query: 186 R 188
           R
Sbjct: 327 R 327


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/61 (45%), Positives = 45/61 (73%)
 Frame = +3

Query: 9   VEDYQRNFIKLMSPLTNVPEDIVLSNFINGLKGEIKVDLPLMDPRNLEEAMELAIKVEGR 188
           V +Y+R FI+L++PL  +PE I  + F++ LK EIK ++ +M P +L+ AMELA++VE +
Sbjct: 193 VVEYRRKFIELLAPLEGIPESIAQAQFVSKLKEEIKNEVRIMGPSSLDHAMELAVQVEEK 252

Query: 189 L 191
           L
Sbjct: 253 L 253


>ref|XP_004172376.1| PREDICTED: uncharacterized protein LOC101223371 [Cucumis sativus]
          Length = 943

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/61 (40%), Positives = 42/61 (68%)
 Frame = +3

Query: 6   TVEDYQRNFIKLMSPLTNVPEDIVLSNFINGLKGEIKVDLPLMDPRNLEEAMELAIKVEG 185
           TVE+Y+  F KL++PL+++PE +V   F++GLK  I+ ++   +P+ L + M +A KVE 
Sbjct: 203 TVEEYRNLFDKLVAPLSDLPEKVVEETFMSGLKPWIQTEMDFCEPKGLSQMMRIAHKVEN 262

Query: 186 R 188
           R
Sbjct: 263 R 263


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