BLASTX nr result

ID: Atractylodes22_contig00042281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042281
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator c...    96   6e-18
ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thali...    87   4e-15
ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arab...    84   2e-14
ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...    84   3e-14
ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homo...    82   9e-14

>ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
           [Glycine max]
          Length = 794

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 49/99 (49%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
 Frame = +1

Query: 358 SYPMKFTSLSQTGGYNLPPCHIVNLCGFHILLDCPLDLSALTIFSPLSTSLYEKLDEQTF 537
           S  MKFT LS+ GG++ PPCH++N CG  ILLDCPLDLSAL  FSP+ T+L     E+++
Sbjct: 85  SSSMKFTCLSKGGGFHFPPCHMLNFCGIRILLDCPLDLSALMAFSPVPTALDCLPVEESY 144

Query: 538 ASPSSISLDTPL-VGQSQKTKKLLDRTNLIPAEPYYKTV 651
            + ++   D+    G+ QK + LLD  +L+ AEP+YKTV
Sbjct: 145 NTEANAFFDSRFGSGKRQKIENLLDAKSLLFAEPWYKTV 183


>ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thaliana]
           gi|332641036|gb|AEE74557.1| integrator complex subunit 9
           [Arabidopsis thaliana]
          Length = 699

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 42/96 (43%), Positives = 64/96 (66%)
 Frame = +1

Query: 367 MKFTSLSQTGGYNLPPCHIVNLCGFHILLDCPLDLSALTIFSPLSTSLYEKLDEQTFASP 546
           M+ T LS+  G++ PPCH++NLCGF IL+DCPLDLSA+ IFSP+ + +  +  E  + S 
Sbjct: 1   MELTCLSKGDGFHYPPCHMLNLCGFRILIDCPLDLSAIKIFSPVPSGVGSEASE--YLSD 58

Query: 547 SSISLDTPLVGQSQKTKKLLDRTNLIPAEPYYKTVE 654
            S+    P + + QK ++ L   +L+  EP+YKTV+
Sbjct: 59  ESLDAQNP-IQKKQKLERQLTCADLVCEEPWYKTVK 93


>ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arabidopsis lyrata subsp.
           lyrata] gi|297328374|gb|EFH58793.1| hypothetical protein
           ARALYDRAFT_896920 [Arabidopsis lyrata subsp. lyrata]
          Length = 699

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 41/96 (42%), Positives = 63/96 (65%)
 Frame = +1

Query: 367 MKFTSLSQTGGYNLPPCHIVNLCGFHILLDCPLDLSALTIFSPLSTSLYEKLDEQTFASP 546
           MK T LS+  G++ PPCH++NLCGF IL+DCPLDLSA+ IFSP+ + +  +  +  + S 
Sbjct: 1   MKLTCLSKGDGFHYPPCHMLNLCGFRILIDCPLDLSAIKIFSPVISCVASEASK--YPSD 58

Query: 547 SSISLDTPLVGQSQKTKKLLDRTNLIPAEPYYKTVE 654
            S+    P + +  K ++ L   +L+  EP+YKTV+
Sbjct: 59  ESLDAQNP-IQKKHKLERQLTFADLVCEEPWYKTVK 93


>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 43/95 (45%), Positives = 60/95 (63%)
 Frame = +1

Query: 367 MKFTSLSQTGGYNLPPCHIVNLCGFHILLDCPLDLSALTIFSPLSTSLYEKLDEQTFASP 546
           MKFT LS+ G +  PPCHI+ + GF ILLDCPLDLS+L IFSP+ T  +   +     SP
Sbjct: 82  MKFTCLSKGGNFYFPPCHIITVSGFRILLDCPLDLSSLMIFSPIPTHAFSNPE---LPSP 138

Query: 547 SSISLDTPLVGQSQKTKKLLDRTNLIPAEPYYKTV 651
            S+        + QK ++ +D + LI A+P++KTV
Sbjct: 139 DSVD------QKRQKHERPIDSSELIRAQPWFKTV 167


>ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homolog [Cucumis sativus]
          Length = 693

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 44/96 (45%), Positives = 62/96 (64%)
 Frame = +1

Query: 367 MKFTSLSQTGGYNLPPCHIVNLCGFHILLDCPLDLSALTIFSPLSTSLYEKLDEQTFASP 546
           M+FT LS+ G + +PPCH++N+CGF I  DCP+D SAL+IFSP+ + L    D++  +  
Sbjct: 1   MEFTCLSKGGCFYMPPCHMLNVCGFRIQFDCPVDFSALSIFSPVPSDLDVLSDKEPSSHL 60

Query: 547 SSISLDTPLVGQSQKTKKLLDRTNLIPAEPYYKTVE 654
              SLD  L   S +T+K LD   LI AEP YK ++
Sbjct: 61  GHGSLD--LDNVSDETEKPLDVGYLIKAEPCYKIIK 94


Top