BLASTX nr result

ID: Atractylodes22_contig00042270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042270
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306437.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   168   4e-40
ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containi...   164   5e-39
ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containi...   164   5e-39
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]   164   5e-39

>ref|XP_002306437.1| predicted protein [Populus trichocarpa] gi|222855886|gb|EEE93433.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  176 bits (446), Expect = 2e-42
 Identities = 84/102 (82%), Positives = 92/102 (90%)
 Frame = +3

Query: 3   EMENKGCSPNECTYNTLLHGLCKARQLDKGVELYGVMKENDMKLESGSYGTFLRALCRNN 182
           EME KGCSPN CTYNTLLHG CK R+L+KGVELYGV+K+  MKLE+ SY TF+RALCR  
Sbjct: 359 EMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASYATFVRALCREG 418

Query: 183 RVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAKEQGL 308
           RVAEAYEVFDYAVESKSLTDVAAY+TLESTLKWLKKA+EQGL
Sbjct: 419 RVAEAYEVFDYAVESKSLTDVAAYTTLESTLKWLKKAREQGL 460


>ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g17670-like [Glycine max]
          Length = 456

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/104 (75%), Positives = 92/104 (88%)
 Frame = +3

Query: 3   EMENKGCSPNECTYNTLLHGLCKARQLDKGVELYGVMKENDMKLESGSYGTFLRALCRNN 182
           EME KGCSPN CTYNTLLHGLCKAR ++K V+ Y V++   +KL++ SYGTF+RALCR+ 
Sbjct: 353 EMEAKGCSPNACTYNTLLHGLCKARLVEKAVKFYQVIRAGGLKLDTASYGTFVRALCRDG 412

Query: 183 RVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAKEQGLLL 314
           R+AEAYEVFDYAVESKSLTDVAAYSTLESTLKWL+KAKEQGL +
Sbjct: 413 RIAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLRKAKEQGLAI 456


>ref|XP_003635566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like, partial [Vitis vinifera]
          Length = 253

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/102 (74%), Positives = 85/102 (83%)
 Frame = +3

Query: 3   EMENKGCSPNECTYNTLLHGLCKARQLDKGVELYGVMKENDMKLESGSYGTFLRALCRNN 182
           EME KGCSPN CTYNTLLHGLCK R L++G+ELYGVMK   MKLE  SY TF+RALC+  
Sbjct: 150 EMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVRALCKEG 209

Query: 183 RVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAKEQGL 308
           RVAEAYE FDY VESKS  DV AYSTLE++LKWL+KA+EQGL
Sbjct: 210 RVAEAYEAFDYVVESKSFDDVTAYSTLENSLKWLRKAREQGL 251


>ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like [Vitis vinifera]
          Length = 458

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/102 (74%), Positives = 85/102 (83%)
 Frame = +3

Query: 3   EMENKGCSPNECTYNTLLHGLCKARQLDKGVELYGVMKENDMKLESGSYGTFLRALCRNN 182
           EME KGCSPN CTYNTLLHGLCK R L++G+ELYGVMK   MKLE  SY TF+RALC+  
Sbjct: 355 EMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVRALCKEG 414

Query: 183 RVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAKEQGL 308
           RVAEAYE FDY VESKS  DV AYSTLE++LKWL+KA+EQGL
Sbjct: 415 RVAEAYEAFDYVVESKSFDDVTAYSTLENSLKWLRKAREQGL 456


>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/102 (74%), Positives = 85/102 (83%)
 Frame = +3

Query: 3   EMENKGCSPNECTYNTLLHGLCKARQLDKGVELYGVMKENDMKLESGSYGTFLRALCRNN 182
           EME KGCSPN CTYNTLLHGLCK R L++G+ELYGVMK   MKLE  SY TF+RALC+  
Sbjct: 369 EMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVRALCKEG 428

Query: 183 RVAEAYEVFDYAVESKSLTDVAAYSTLESTLKWLKKAKEQGL 308
           RVAEAYE FDY VESKS  DV AYSTLE++LKWL+KA+EQGL
Sbjct: 429 RVAEAYEAFDYVVESKSFDDVTAYSTLENSLKWLRKAREQGL 470


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