BLASTX nr result

ID: Atractylodes22_contig00042251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042251
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin...   153   2e-35
ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin...   153   2e-35
emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]   153   2e-35
ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35
ref|XP_002309903.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34

>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
           [Vitis vinifera]
          Length = 500

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/90 (83%), Positives = 80/90 (88%)
 Frame = -3

Query: 275 QQLEESGRARKLIASRVQNPKTTDGFQVLVKHRQSVTAVALSEDDSKGFSASKDGYIVHW 96
           +QLEESGR R+LIASRVQ P+T D F+VLVKHRQSVTAVALSEDD KGFSASKDG IV W
Sbjct: 132 EQLEESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVALSEDDLKGFSASKDGTIVQW 191

Query: 95  DVDSGKAEAYAWPSEEVLKSHGAKDPQGRA 6
           DVDSGK E Y WP+EEVLKSHGAKDPQGRA
Sbjct: 192 DVDSGKGEKYMWPTEEVLKSHGAKDPQGRA 221


>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
           [Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
           protein product [Vitis vinifera]
          Length = 519

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/90 (83%), Positives = 80/90 (88%)
 Frame = -3

Query: 275 QQLEESGRARKLIASRVQNPKTTDGFQVLVKHRQSVTAVALSEDDSKGFSASKDGYIVHW 96
           +QLEESGR R+LIASRVQ P+T D F+VLVKHRQSVTAVALSEDD KGFSASKDG IV W
Sbjct: 132 EQLEESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVALSEDDLKGFSASKDGTIVQW 191

Query: 95  DVDSGKAEAYAWPSEEVLKSHGAKDPQGRA 6
           DVDSGK E Y WP+EEVLKSHGAKDPQGRA
Sbjct: 192 DVDSGKGEKYMWPTEEVLKSHGAKDPQGRA 221


>emb|CAN60229.1| hypothetical protein VITISV_042496 [Vitis vinifera]
          Length = 573

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/90 (83%), Positives = 80/90 (88%)
 Frame = -3

Query: 275 QQLEESGRARKLIASRVQNPKTTDGFQVLVKHRQSVTAVALSEDDSKGFSASKDGYIVHW 96
           +QLEESGR R+LIASRVQ P+T D F+VLVKHRQSVTAVALSEDD KGFSASKDG IV W
Sbjct: 132 EQLEESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVALSEDDLKGFSASKDGTIVQW 191

Query: 95  DVDSGKAEAYAWPSEEVLKSHGAKDPQGRA 6
           DVDSGK E Y WP+EEVLKSHGAKDPQGRA
Sbjct: 192 DVDSGKGEKYMWPTEEVLKSHGAKDPQGRA 221


>ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|222855688|gb|EEE93235.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/90 (77%), Positives = 82/90 (91%)
 Frame = -3

Query: 275 QQLEESGRARKLIASRVQNPKTTDGFQVLVKHRQSVTAVALSEDDSKGFSASKDGYIVHW 96
           QQLEESGR R+ IASRVQ P++ DGF+VLVKHRQSVTAV LS+DDSKGFSASKDG I+HW
Sbjct: 129 QQLEESGRLRRAIASRVQKPESVDGFEVLVKHRQSVTAVCLSDDDSKGFSASKDGTILHW 188

Query: 95  DVDSGKAEAYAWPSEEVLKSHGAKDPQGRA 6
           DVDSGKAE Y WP++E+L+SHGAK+P+GRA
Sbjct: 189 DVDSGKAEKYQWPNDEILRSHGAKNPEGRA 218


>ref|XP_002309903.1| predicted protein [Populus trichocarpa] gi|222852806|gb|EEE90353.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/90 (74%), Positives = 82/90 (91%)
 Frame = -3

Query: 275 QQLEESGRARKLIASRVQNPKTTDGFQVLVKHRQSVTAVALSEDDSKGFSASKDGYIVHW 96
           QQLE+SGR R+ IASRVQ P++ DGF++LVKHRQSVTA+ LS+DDSKGFSASKDG I+HW
Sbjct: 131 QQLEDSGRLRRAIASRVQKPESVDGFEILVKHRQSVTAICLSDDDSKGFSASKDGTILHW 190

Query: 95  DVDSGKAEAYAWPSEEVLKSHGAKDPQGRA 6
           DVDSGKAE Y WP+EE+L+SHG+K+P+GRA
Sbjct: 191 DVDSGKAERYQWPNEEILRSHGSKNPEGRA 220


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