BLASTX nr result
ID: Atractylodes22_contig00042250
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00042250
(616 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 244 9e-63
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 244 9e-63
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 244 9e-63
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 244 1e-62
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 243 2e-62
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 244 bits (623), Expect = 9e-63
Identities = 120/203 (59%), Positives = 158/203 (77%)
Frame = -1
Query: 613 AEKILGMEIVRDRQSRTLKLSQKGYIQKVLKKFNLDGTKLISTPLPLHIKVSKADCPSSE 434
A KILGM+I RDR+ R + LSQK Y++KVL++FN+ K ISTPLP++ K+S PS+E
Sbjct: 1018 ANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNE 1077
Query: 433 EEKAMMMKVPYASAVGSLMYAMVCTRPDLAHSVGVVSRYLTNPGKPHWEAVKMILRYLKG 254
E+ M +VPYASAVGSLMYAM+CTRPD+A +VGVVSR++ +PGK HW AVK I+RY+KG
Sbjct: 1078 AERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKG 1137
Query: 253 TSFHVVHFGNKDGLCDLVGYCDSDYAGDRDKWKSTSGYVFTLGGTAISWRAKLQTIVVLS 74
TS V FG + + GY DSD+AGD DK KST+GYVFTL G A+SW +KLQT+V LS
Sbjct: 1138 TSGVAVCFGGSE--LTVWGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALS 1195
Query: 73 TTEAELISAVEAAKEALYLRQLL 5
TTEAE ++A +A KEA+++++L+
Sbjct: 1196 TTEAEYMAATQACKEAIWMQRLM 1218
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 244 bits (623), Expect = 9e-63
Identities = 120/203 (59%), Positives = 158/203 (77%)
Frame = -1
Query: 613 AEKILGMEIVRDRQSRTLKLSQKGYIQKVLKKFNLDGTKLISTPLPLHIKVSKADCPSSE 434
A KILGM+I RDR+ R + LSQK Y++KVL++FN+ K ISTPLP++ K+S PS+E
Sbjct: 1018 ANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNE 1077
Query: 433 EEKAMMMKVPYASAVGSLMYAMVCTRPDLAHSVGVVSRYLTNPGKPHWEAVKMILRYLKG 254
E+ M +VPYASAVGSLMYAM+CTRPD+A +VGVVSR++ +PGK HW AVK I+RY+KG
Sbjct: 1078 AERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKG 1137
Query: 253 TSFHVVHFGNKDGLCDLVGYCDSDYAGDRDKWKSTSGYVFTLGGTAISWRAKLQTIVVLS 74
TS V FG + + GY DSD+AGD DK KST+GYVFTL G A+SW +KLQT+V LS
Sbjct: 1138 TSGVAVCFGGSE--LTVRGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALS 1195
Query: 73 TTEAELISAVEAAKEALYLRQLL 5
TTEAE ++A +A KEA+++++L+
Sbjct: 1196 TTEAEYMAATQACKEAIWMQRLM 1218
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 244 bits (623), Expect = 9e-63
Identities = 122/203 (60%), Positives = 161/203 (79%)
Frame = -1
Query: 613 AEKILGMEIVRDRQSRTLKLSQKGYIQKVLKKFNLDGTKLISTPLPLHIKVSKADCPSSE 434
A++ILGM+I+RDRQ++ L LSQ+ YI+KVL++F+++ K +STPL +H K+ K CPSSE
Sbjct: 1039 AKQILGMKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSE 1098
Query: 433 EEKAMMMKVPYASAVGSLMYAMVCTRPDLAHSVGVVSRYLTNPGKPHWEAVKMILRYLKG 254
+EK M +VPY+SAVGSLMYAMVCTRPD+AH+VGVVSR+L+NPG+ HW+AVK ILRYL+G
Sbjct: 1099 KEKEEMQRVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRG 1158
Query: 253 TSFHVVHFGNKDGLCDLVGYCDSDYAGDRDKWKSTSGYVFTLGGTAISWRAKLQTIVVLS 74
TS + FG G L GY DSD AGD D KSTSGY+ T G A+SW+++LQ V LS
Sbjct: 1159 TSSLSLCFGT--GKPILTGYTDSDMAGDIDTRKSTSGYLITYAGGAVSWQSRLQKCVDLS 1216
Query: 73 TTEAELISAVEAAKEALYLRQLL 5
TTEAE I++VEA+KE L++++ L
Sbjct: 1217 TTEAEFIASVEASKEMLWMKKFL 1239
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 244 bits (622), Expect = 1e-62
Identities = 123/203 (60%), Positives = 157/203 (77%)
Frame = -1
Query: 613 AEKILGMEIVRDRQSRTLKLSQKGYIQKVLKKFNLDGTKLISTPLPLHIKVSKADCPSSE 434
A++ILGM+IVR+R SR L LSQ+ YI++VL++FN+ K +STPL H+K+SK CP++
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1100
Query: 433 EEKAMMMKVPYASAVGSLMYAMVCTRPDLAHSVGVVSRYLTNPGKPHWEAVKMILRYLKG 254
EEK M KVPY+SAVGSLMYAMVCTRPD+AH+VGVVSR+L NPGK HWEAVK ILRYL+G
Sbjct: 1101 EEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRG 1160
Query: 253 TSFHVVHFGNKDGLCDLVGYCDSDYAGDRDKWKSTSGYVFTLGGTAISWRAKLQTIVVLS 74
T+ + FG D + L GY D+D AGD D KS++GY+FT G AISW++KLQ V LS
Sbjct: 1161 TTGDCLCFGGSDPI--LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALS 1218
Query: 73 TTEAELISAVEAAKEALYLRQLL 5
TTEAE I+A E KE ++L++ L
Sbjct: 1219 TTEAEYIAATETGKEMIWLKRFL 1241
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 243 bits (621), Expect = 2e-62
Identities = 120/203 (59%), Positives = 158/203 (77%)
Frame = -1
Query: 613 AEKILGMEIVRDRQSRTLKLSQKGYIQKVLKKFNLDGTKLISTPLPLHIKVSKADCPSSE 434
A KILGM+I RDR+ R + LSQK Y++KVL++FN+ K ISTPLP++ K+S PS+E
Sbjct: 1018 ANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNE 1077
Query: 433 EEKAMMMKVPYASAVGSLMYAMVCTRPDLAHSVGVVSRYLTNPGKPHWEAVKMILRYLKG 254
E+ M +VPYASAVGSLMYAM+CTRPD+A +VGVVSR++ +PGK HW AVK I+RY+KG
Sbjct: 1078 AERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKG 1137
Query: 253 TSFHVVHFGNKDGLCDLVGYCDSDYAGDRDKWKSTSGYVFTLGGTAISWRAKLQTIVVLS 74
TS V FG + + GY DSD+AGD DK KST+GYVFTL G A+SW +KLQT+V LS
Sbjct: 1138 TSGVAVCFGGSE--LTVRGYVDSDFAGDHDKRKSTTGYVFTLTGGAVSWLSKLQTVVALS 1195
Query: 73 TTEAELISAVEAAKEALYLRQLL 5
TTEAE ++A +A KEA+++++L+
Sbjct: 1196 TTEAEYMAATQACKEAIWMQRLM 1218