BLASTX nr result

ID: Atractylodes22_contig00042237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042237
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272059.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...   141   1e-31
emb|CBI33105.3| unnamed protein product [Vitis vinifera]              135   7e-30
ref|XP_002308785.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
ref|XP_002532714.1| conserved hypothetical protein [Ricinus comm...   132   4e-29
ref|XP_002322733.1| predicted protein [Populus trichocarpa] gi|2...   129   6e-28

>ref|XP_002272059.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Vitis vinifera]
          Length = 893

 Score =  141 bits (355), Expect = 1e-31
 Identities = 85/236 (36%), Positives = 135/236 (57%), Gaps = 21/236 (8%)
 Frame = +3

Query: 12  KSKMMDFVNMIQSSDVGLAVSHLSIFTSYCVPEALVMLYKSSDKRNKVCAEHSIQDFIDS 191
           KS++++F+ +    D   A  +L +F S   P ALVMLY S  K NK  A+ +I+ F++S
Sbjct: 197 KSQLLEFLMLTPKDDTESAAGYLQVFMSSSAPSALVMLYMSPTKSNKETADDTIRQFLNS 256

Query: 192 ATFMLPQPISSQCLPIVLRFCELLRRPGALDDHVYRLCRRSLGVLLKHAKKVHGG---GN 362
           +  +LP+ +  QC+PIVL FC+LL R    +D +Y  CR +LG L+++   V       N
Sbjct: 257 SRNLLPKSVQIQCVPIVLEFCKLLSRTDH-EDPLYLTCRSTLGSLVENVGVVRASRYCHN 315

Query: 363 NGVIITLQVIISFVAEIASKVSEGLVSSMESISSFGPS-------------RGDVLDFVS 503
           +  +I ++ I+ FV+E+AS +S+ L+SSMES  S G S               DV DF +
Sbjct: 316 SKTLIVVKEILPFVSELASSLSKSLISSMESAGSTGNSLNDGRNLIAGHTLANDVRDFTA 375

Query: 504 FLRPLKAAVIDQT----PLPIPM-QTSCTLSDQSNKIKFLYVLFDDLFTKLLMCLH 656
           FL P+++ +++Q     P+ IP+ +   T      +I+FL+ +F DL TK+  CLH
Sbjct: 376 FLHPVRSVIMEQVSFHGPISIPLGERGSTNPWYGEEIEFLHGIFIDLMTKMDGCLH 431


>emb|CBI33105.3| unnamed protein product [Vitis vinifera]
          Length = 831

 Score =  135 bits (340), Expect = 7e-30
 Identities = 81/231 (35%), Positives = 129/231 (55%), Gaps = 16/231 (6%)
 Frame = +3

Query: 12  KSKMMDFVNMIQSSDVGLAVSHLSIFTSYCVPEALVMLYKSSDKRNKVCAEHSIQDFIDS 191
           KS++++F+ +    D   A  +L +F S   P ALVMLY S  K NK  A+ +I+ F++S
Sbjct: 154 KSQLLEFLMLTPKDDTESAAGYLQVFMSSSAPSALVMLYMSPTKSNKETADDTIRQFLNS 213

Query: 192 ATFMLPQPISSQCLPIVLRFCELLRRPGALDDHVYRLCRRSLGVLLKHAKKVHGG---GN 362
           +  +LP+ +  QC+PIVL FC+LL R    +D +Y  CR +LG L+++   V       N
Sbjct: 214 SRNLLPKSVQIQCVPIVLEFCKLLSRTDH-EDPLYLTCRSTLGSLVENVGVVRASRYCHN 272

Query: 363 NGVIITLQVIISFVAEIASKVSEGLVSSMESISSFGPS-------------RGDVLDFVS 503
           +  +I ++ I+ FV+E+AS +S+ L+SSMES  S G S               DV DF +
Sbjct: 273 SKTLIVVKEILPFVSELASSLSKSLISSMESAGSTGNSLNDGRNLIAGHTLANDVRDFTA 332

Query: 504 FLRPLKAAVIDQTPLPIPMQTSCTLSDQSNKIKFLYVLFDDLFTKLLMCLH 656
           FL P+++ +++Q                 ++I+FL+ +F DL TK+  CLH
Sbjct: 333 FLHPVRSVIMEQVSF--------------HEIEFLHGIFIDLMTKMDGCLH 369


>ref|XP_002308785.1| predicted protein [Populus trichocarpa] gi|222854761|gb|EEE92308.1|
           predicted protein [Populus trichocarpa]
          Length = 633

 Score =  134 bits (336), Expect = 2e-29
 Identities = 86/225 (38%), Positives = 128/225 (56%), Gaps = 11/225 (4%)
 Frame = +3

Query: 12  KSKMMDFVNMIQSSDVGLAVSHLSIFTSYCVPEALVMLYKSSDKRNKVCAEHSIQDFIDS 191
           K  M +F ++    D   A  HL++F S   P ALV LY SS K NK CAE +I+ F++S
Sbjct: 225 KELMNEFFSLTPKDDNEDASGHLNVFLSNSAPAALVALYVSSIKGNKECAEGAIRHFLNS 284

Query: 192 ATFMLPQPISSQCLPIVLRFCELLRRPGALDDHVYRLCRRSLGVLLKHAKKVHG----GG 359
               LP+ +  QC+PIV+ FC LLR+ G+ DD +Y +CR  LG LL++     G    GG
Sbjct: 285 CRISLPKNLHLQCVPIVMEFCNLLRKVGS-DDPLYVVCRSCLGSLLENGGGTCGWRYHGG 343

Query: 360 NNGVIITLQVIISFVAEIASKVSEGLVSSMESISSFGPSRGDVLDFVSFLRPLKAAVIDQ 539
             G  + +Q I  FV+E+ SK+S+ L  S+    S GPS   V DF +FL PL + + +Q
Sbjct: 344 EEGKGVVMQEIFPFVSELGSKLSKDLTGSV--AESMGPSEAVVKDFSAFLIPLHSVISEQ 401

Query: 540 ----TPLPIPMQT---SCTLSDQSNKIKFLYVLFDDLFTKLLMCL 653
               +P+ +P++    +C L   + +I+ L+V+F DL   +  CL
Sbjct: 402 RGFGSPISMPLKKRAFNCPL--YAKEIEQLHVIFIDLLDIMEKCL 444


>ref|XP_002532714.1| conserved hypothetical protein [Ricinus communis]
           gi|223527541|gb|EEF29663.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 876

 Score =  132 bits (333), Expect = 4e-29
 Identities = 87/225 (38%), Positives = 124/225 (55%), Gaps = 11/225 (4%)
 Frame = +3

Query: 12  KSKMMDFVNMIQSSDVGLAVSHLSIFTSYCVPEALVMLYKSSDKRNKVCAEHSIQDFIDS 191
           KS M +F ++    D   A+ HL IF     P ALVMLY S+ K NK CAE SI+ F+ S
Sbjct: 219 KSLMNEFFSLTPKDDNESAIGHLQIFMLSSAPAALVMLYVSNIKGNKECAESSIRHFLSS 278

Query: 192 ATFMLPQPISSQCLPIVLRFCELLRRPGALDDHVYRLCRRSLGVLLKHAKKVHG------ 353
               LP+ + +QC PIVL FC+LLR   A +D +Y  CR SLG LL+      G      
Sbjct: 279 CRSSLPKSLHTQCAPIVLEFCKLLRNV-AYNDPLYLCCRSSLGSLLESMGVSRGLVKYGC 337

Query: 354 GGNNGVIITLQVIISFVAEIASKVSEGLVSSMESISSFGPSRGDVLDFVSFLRPLKAAVI 533
           G  +   + +Q I  FV+E+A ++S  L S+++S +S GP   DV DF +FL PL   + 
Sbjct: 338 GAEDVKGLIIQDIFPFVSELAGRLSAELESTVKSETSLGPLASDVRDFSAFLLPLHTTIR 397

Query: 534 DQT----PLPIPMQTS-CTLSDQSNKIKFLYVLFDDLFTKLLMCL 653
           +Q     P+ +P+  S  +    + +I+ LY +F DL  K+  CL
Sbjct: 398 EQVGFRGPISMPLDKSGFSHPLYAEEIENLYDIFVDLMMKMDWCL 442


>ref|XP_002322733.1| predicted protein [Populus trichocarpa] gi|222867363|gb|EEF04494.1|
           predicted protein [Populus trichocarpa]
          Length = 592

 Score =  129 bits (323), Expect = 6e-28
 Identities = 83/225 (36%), Positives = 125/225 (55%), Gaps = 11/225 (4%)
 Frame = +3

Query: 12  KSKMMDFVNMIQSSDVGLAVSHLSIFTSYCVPEALVMLYKSSDKRNKVCAEHSIQDFIDS 191
           K  M +F ++    +   A  HL +F S   P  LV LY SS K NK CAE +I+ F++S
Sbjct: 177 KELMNEFFSLTPKDNNEDASGHLDVFLSNSAPAVLVALYVSSIKGNKECAEGAIRHFLNS 236

Query: 192 ATFMLPQPISSQCLPIVLRFCELLRRPGALDDHVYRLCRRSLGVLLKHAKKVHG----GG 359
               LP+ +  QC+PIV+ FC LLR+ G+ DD +Y +CR  LG LL++ +   G    G 
Sbjct: 237 CRISLPKNLHLQCVPIVMEFCNLLRKVGS-DDPLYVVCRSCLGSLLENGRGTCGWRYHGE 295

Query: 360 NNGVIITLQVIISFVAEIASKVSEGLVSSMESISSFGPSRGDVLDFVSFLRPLKAAVIDQ 539
             G    +Q I  FV+E+ SK+ + L+ S+  + S GPS  DV DF +FL PL + + +Q
Sbjct: 296 EEGKGAVVQEIFPFVSELGSKLFKDLMGSV--VESMGPSEADVKDFSAFLIPLHSVISEQ 353

Query: 540 ----TPLPIPMQT---SCTLSDQSNKIKFLYVLFDDLFTKLLMCL 653
               +P+ +P+      C L   + +I+ L+V+F DL   +  CL
Sbjct: 354 RGFRSPISMPLNKLAFHCPL--YAKEIEQLHVIFIDLLNIMEKCL 396


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