BLASTX nr result

ID: Atractylodes22_contig00042221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042221
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi...   128   7e-28
emb|CBI19389.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,...   120   1e-25

>ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|222843533|gb|EEE81080.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  141 bits (355), Expect = 1e-31
 Identities = 64/85 (75%), Positives = 78/85 (91%)
 Frame = -1

Query: 605 GSTYMILICSLAMEQRFKDSIGVIFDMLNDSMSPDMLTYKTLLEGLCREGRADEAFDILE 426
           GSTYMILICSL ME+RF+++IGV+FDML DSMSPD+LTY+T+LEGLCREG  D+AF++LE
Sbjct: 240 GSTYMILICSLGMERRFEEAIGVVFDMLGDSMSPDLLTYRTVLEGLCREGMVDKAFELLE 299

Query: 425 EFRKKDSFMNEKTYKNLLNGLHYVS 351
           E+RKKD FM EK YK+LLNGLH+VS
Sbjct: 300 EWRKKDGFMGEKNYKSLLNGLHFVS 324


>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
           gi|449516331|ref|XP_004165200.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
          Length = 393

 Score =  128 bits (322), Expect = 7e-28
 Identities = 60/83 (72%), Positives = 73/83 (87%)
 Frame = -1

Query: 602 STYMILICSLAMEQRFKDSIGVIFDMLNDSMSPDMLTYKTLLEGLCREGRADEAFDILEE 423
           STYMILICSLAME+RF+++I + FDML +SM+PD+LTY+TLLEGLCREGR  EAFD+L+E
Sbjct: 308 STYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDE 367

Query: 422 FRKKDSFMNEKTYKNLLNGLHYV 354
            RK+D  MNEKT+K LLNGLH V
Sbjct: 368 LRKRDKLMNEKTFKTLLNGLHTV 390


>emb|CBI19389.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  120 bits (302), Expect = 1e-25
 Identities = 53/84 (63%), Positives = 75/84 (89%)
 Frame = -1

Query: 602 STYMILICSLAMEQRFKDSIGVIFDMLNDSMSPDMLTYKTLLEGLCREGRADEAFDILEE 423
           STY+ILICSL+ME+RF+++  ++FDML +SM+PD+LTYKTLLEGL REG+ ++AF++LE+
Sbjct: 280 STYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLSREGKCNDAFELLED 339

Query: 422 FRKKDSFMNEKTYKNLLNGLHYVS 351
            RKKD++M EKTYK L+ GLH++S
Sbjct: 340 LRKKDAWMGEKTYKTLVKGLHFLS 363


>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  120 bits (302), Expect = 1e-25
 Identities = 53/84 (63%), Positives = 75/84 (89%)
 Frame = -1

Query: 602 STYMILICSLAMEQRFKDSIGVIFDMLNDSMSPDMLTYKTLLEGLCREGRADEAFDILEE 423
           STY+ILICSL+ME+RF+++  ++FDML +SM+PD+LTYKTLLEGL REG+ ++AF++LE+
Sbjct: 308 STYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLSREGKCNDAFELLED 367

Query: 422 FRKKDSFMNEKTYKNLLNGLHYVS 351
            RKKD++M EKTYK L+ GLH++S
Sbjct: 368 LRKKDAWMGEKTYKTLVKGLHFLS 391


>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 382

 Score =  120 bits (302), Expect = 1e-25
 Identities = 56/85 (65%), Positives = 72/85 (84%)
 Frame = -1

Query: 605 GSTYMILICSLAMEQRFKDSIGVIFDMLNDSMSPDMLTYKTLLEGLCREGRADEAFDILE 426
           G TYMILICSLA++ R  ++I V+FDML +SMSPD LTY+T+LEGLCREG+ DEAF++LE
Sbjct: 296 GGTYMILICSLAVDLRLGEAIDVVFDMLANSMSPDFLTYRTVLEGLCREGKTDEAFELLE 355

Query: 425 EFRKKDSFMNEKTYKNLLNGLHYVS 351
           EFRK+D  M++KTYK LLN L +V+
Sbjct: 356 EFRKRDMSMSQKTYKILLNALQFVN 380


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