BLASTX nr result

ID: Atractylodes22_contig00042200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042200
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat...    62   6e-08
ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266...    58   9e-07
emb|CBI35955.3| unnamed protein product [Vitis vinifera]               58   9e-07
emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]    58   9e-07

>ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
           gi|449522932|ref|XP_004168479.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
          Length = 705

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +3

Query: 252 PNGRSHHTQIEPRKFSEVF-DYLDHLLRGCTSFRQSKQIHAQILRFGGLSTVFLSSRLVS 428
           P   + H+Q     + E   D+ DHLLR C   + SKQ+H+  +  G   + F+S+RLVS
Sbjct: 19  PLSINFHSQFSSITYDEDLPDFFDHLLRQCNGIQHSKQVHSATVVTGAYCSAFVSARLVS 78

Query: 429 IYGRFERLNDARKVF 473
           IY R+  ++DARKVF
Sbjct: 79  IYSRYGLVSDARKVF 93


>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/99 (36%), Positives = 59/99 (59%)
 Frame = +3

Query: 177  MLHVSPSNSRRLLRISCSLGSWRWIPNGRSHHTQIEPRKFSEVFDYLDHLLRGCTSFRQS 356
            MLH S   SRRL+ IS       ++PN     + I  +  ++V D+ + LL+ C+    S
Sbjct: 839  MLHGS---SRRLISIS-------FLPNLSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLS 888

Query: 357  KQIHAQILRFGGLSTVFLSSRLVSIYGRFERLNDARKVF 473
            +QIH+QI+  G   + FL++R+VS+Y  F  ++DA++VF
Sbjct: 889  QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF 927


>emb|CBI35955.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/99 (36%), Positives = 59/99 (59%)
 Frame = +3

Query: 177 MLHVSPSNSRRLLRISCSLGSWRWIPNGRSHHTQIEPRKFSEVFDYLDHLLRGCTSFRQS 356
           MLH S   SRRL+ IS       ++PN     + I  +  ++V D+ + LL+ C+    S
Sbjct: 1   MLHGS---SRRLISIS-------FLPNLSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLS 50

Query: 357 KQIHAQILRFGGLSTVFLSSRLVSIYGRFERLNDARKVF 473
           +QIH+QI+  G   + FL++R+VS+Y  F  ++DA++VF
Sbjct: 51  QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF 89


>emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
          Length = 954

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/99 (36%), Positives = 59/99 (59%)
 Frame = +3

Query: 177 MLHVSPSNSRRLLRISCSLGSWRWIPNGRSHHTQIEPRKFSEVFDYLDHLLRGCTSFRQS 356
           MLH S   SRRL+ IS       ++PN     + I  +  ++V D+ + LL+ C+    S
Sbjct: 1   MLHGS---SRRLISIS-------FLPNLSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLS 50

Query: 357 KQIHAQILRFGGLSTVFLSSRLVSIYGRFERLNDARKVF 473
           +QIH+QI+  G   + FL++R+VS+Y  F  ++DA++VF
Sbjct: 51  QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF 89


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