BLASTX nr result
ID: Atractylodes22_contig00042188
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00042188
(1000 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi... 493 e-137
emb|CBI29835.3| unnamed protein product [Vitis vinifera] 493 e-137
ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containi... 483 e-134
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ... 478 e-133
ref|XP_002529506.1| pentatricopeptide repeat-containing protein,... 478 e-132
>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 493 bits (1268), Expect = e-137
Identities = 231/307 (75%), Positives = 270/307 (87%), Gaps = 4/307 (1%)
Frame = -3
Query: 911 KSLLRC----CSGEANTKRLVGFVDYDKGERQVSVLVTGLKKSDLSKRDRLRVQGDRFQK 744
K+L+ C G K+ V FVDYD G+ QVS V+GL+K+D+ K RLRV+ DRFQK
Sbjct: 34 KTLISCKESKSKGALEEKKKVVFVDYDNGKHQVSTHVSGLRKADIPKHYRLRVEADRFQK 93
Query: 743 DWAISELVSKILKLNQREDIDGLLNRWVGRFARKNYPILIKEISQTGSIEHCNQVFKWMK 564
DW++SE+V ++LKLN +D++GLLNRWVGRF+RKN+P+LI+EI+Q GS+EH QVF+WMK
Sbjct: 94 DWSVSEVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPLLIREITQIGSLEHSVQVFRWMK 153
Query: 563 NQKNYCARNDIYNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQW 384
NQKNYCARNDIYNMMIRLHARHN DQARGLFFEMQKWRCKPDAETYNA+I+AHGRAGQW
Sbjct: 154 NQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQW 213
Query: 383 RWATNIMEDMLRAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIV 204
RWA NIM+DMLRAA+PPSRSTYNNLI+ACGSSGNW+EAL V K+MTENG+GPDLVTHNIV
Sbjct: 214 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIV 273
Query: 203 LSAFKTGSQYSKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKRS 24
LSA+K G+QYSK LSYFELMKGT IRPDTTTLNIVI+CLVKLGQ GKAIDIF+SM+EKRS
Sbjct: 274 LSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRS 333
Query: 23 QCSPDIV 3
+C PD+V
Sbjct: 334 ECYPDVV 340
Score = 93.6 bits (231), Expect = 7e-17
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 37/248 (14%)
Frame = -3
Query: 638 YPILIKEISQTGSIEHCNQVFKWMKNQKNYCARNDI--YNMMIRLHARHNQTDQARGLFF 465
+ +I S G IE+C F M + + +I YN +I +A H +A +F
Sbjct: 342 FTTIIHLYSVCGQIENCQTAFNTMLAEG---LKPNIVSYNALIGAYASHGMDKEAFSVFN 398
Query: 464 EMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDMLRAAVPPSRSTYNNLIHACGSSG 285
E++K PD +Y ++++A+G++G+ A + E M R P+ +YN LI A GS G
Sbjct: 399 EIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKG 458
Query: 284 NWREALKVSKRMTENGIGPDLVT-----------------------------------HN 210
EA+++ M NG+ P++V+ +N
Sbjct: 459 LLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYN 518
Query: 209 IVLSAFKTGSQYSKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREK 30
+ ++ + +Y KALS + M+ K++PD T N++I K+ ++G+A+ M +
Sbjct: 519 SAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDL 578
Query: 29 RSQCSPDI 6
+ S ++
Sbjct: 579 KIPLSKEV 586
Score = 82.8 bits (203), Expect = 1e-13
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Frame = -3
Query: 527 NMMIRLHARHNQTDQARGLFFEMQKWR--CKPDAETYNAIISAHGRAGQWRWATNIMEDM 354
N++I + Q +A +F M++ R C PD T+ II + GQ M
Sbjct: 306 NIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTM 365
Query: 353 LRAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQY 174
L + P+ +YN LI A S G +EA V + +NG PD+V++ +L+A+ +
Sbjct: 366 LAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKP 425
Query: 173 SKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKRSQCSPDIV 3
KA+ FELM+ +P+ + N +I G +A++I H M +R+ P+IV
Sbjct: 426 EKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEM--ERNGVQPNIV 480
Score = 79.7 bits (195), Expect = 1e-12
Identities = 45/168 (26%), Positives = 84/168 (50%)
Frame = -3
Query: 530 YNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDML 351
YN I + + D+A L+ M+ + KPD TYN +IS + ++ A +++M+
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Query: 350 RAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYS 171
+P S+ Y+++I A G EA + +M G PD++T+ ++ A+ +
Sbjct: 577 DLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWE 636
Query: 170 KALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKR 27
KA + F M+ ++PD+ + ++ K GQ K + + MREK+
Sbjct: 637 KASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKK 684
Score = 76.6 bits (187), Expect = 8e-12
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Frame = -3
Query: 641 NYPILIKEISQTGSIEHCNQVFKWMKNQKNYCARNDI-YNMMIRLHARHNQTDQARGLFF 465
+Y L+ ++G E +VF+ M+ +N+C N + YN +I + +A +
Sbjct: 411 SYTSLLNAYGKSGKPEKAMKVFELMR--RNHCKPNLVSYNALIDAYGSKGLLTEAVEILH 468
Query: 464 EMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDMLRAAVPPSRSTYNNLIHACGSSG 285
EM++ +P+ + +++A GR GQ +++ + + + YN+ I + S G
Sbjct: 469 EMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVG 528
Query: 284 NWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYSKALSYFELMKGTKIRPDTTTLN 105
+ +AL + + M + PD VT+N+++S S+Y +AL + + M KI +
Sbjct: 529 EYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYS 588
Query: 104 IVIHCLVKLGQFGKAIDIFHSMREKRSQCSPDIV 3
VI K GQ +A +F M K C PD++
Sbjct: 589 SVICAYSKQGQVTEAESMFTKM--KMVGCRPDVI 620
Score = 62.4 bits (150), Expect = 2e-07
Identities = 37/134 (27%), Positives = 63/134 (47%)
Frame = -3
Query: 530 YNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDML 351
YN++I + ++ +A G EM + E Y+++I A+ + GQ A ++ M
Sbjct: 552 YNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMK 611
Query: 350 RAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYS 171
P TY +IHA + NW +A + M + + PD + + ++ AF G Q +
Sbjct: 612 MVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPA 671
Query: 170 KALSYFELMKGTKI 129
K L E M+ KI
Sbjct: 672 KVLVLAEFMREKKI 685
Score = 57.8 bits (138), Expect = 4e-06
Identities = 38/166 (22%), Positives = 80/166 (48%)
Frame = -3
Query: 536 DIYNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMED 357
++Y+ +I +++ Q +A +F +M+ C+PD TY A+I A+ A W A+ + +
Sbjct: 585 EVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLE 644
Query: 356 MLRAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQ 177
M V P ++L+ A G + L +++ M E I + + ++SA +
Sbjct: 645 METDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLRE 704
Query: 176 YSKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSM 39
+ + + +LM+ + LN ++H L K G+ + +F+ +
Sbjct: 705 WREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKI 750
>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 493 bits (1268), Expect = e-137
Identities = 231/307 (75%), Positives = 270/307 (87%), Gaps = 4/307 (1%)
Frame = -3
Query: 911 KSLLRC----CSGEANTKRLVGFVDYDKGERQVSVLVTGLKKSDLSKRDRLRVQGDRFQK 744
K+L+ C G K+ V FVDYD G+ QVS V+GL+K+D+ K RLRV+ DRFQK
Sbjct: 34 KTLISCKESKSKGALEEKKKVVFVDYDNGKHQVSTHVSGLRKADIPKHYRLRVEADRFQK 93
Query: 743 DWAISELVSKILKLNQREDIDGLLNRWVGRFARKNYPILIKEISQTGSIEHCNQVFKWMK 564
DW++SE+V ++LKLN +D++GLLNRWVGRF+RKN+P+LI+EI+Q GS+EH QVF+WMK
Sbjct: 94 DWSVSEVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPLLIREITQIGSLEHSVQVFRWMK 153
Query: 563 NQKNYCARNDIYNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQW 384
NQKNYCARNDIYNMMIRLHARHN DQARGLFFEMQKWRCKPDAETYNA+I+AHGRAGQW
Sbjct: 154 NQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQW 213
Query: 383 RWATNIMEDMLRAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIV 204
RWA NIM+DMLRAA+PPSRSTYNNLI+ACGSSGNW+EAL V K+MTENG+GPDLVTHNIV
Sbjct: 214 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIV 273
Query: 203 LSAFKTGSQYSKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKRS 24
LSA+K G+QYSK LSYFELMKGT IRPDTTTLNIVI+CLVKLGQ GKAIDIF+SM+EKRS
Sbjct: 274 LSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRS 333
Query: 23 QCSPDIV 3
+C PD+V
Sbjct: 334 ECYPDVV 340
Score = 93.6 bits (231), Expect = 7e-17
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 37/248 (14%)
Frame = -3
Query: 638 YPILIKEISQTGSIEHCNQVFKWMKNQKNYCARNDI--YNMMIRLHARHNQTDQARGLFF 465
+ +I S G IE+C F M + + +I YN +I +A H +A +F
Sbjct: 342 FTTIIHLYSVCGQIENCQTAFNTMLAEG---LKPNIVSYNALIGAYASHGMDKEAFSVFN 398
Query: 464 EMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDMLRAAVPPSRSTYNNLIHACGSSG 285
E++K PD +Y ++++A+G++G+ A + E M R P+ +YN LI A GS G
Sbjct: 399 EIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKG 458
Query: 284 NWREALKVSKRMTENGIGPDLVT-----------------------------------HN 210
EA+++ M NG+ P++V+ +N
Sbjct: 459 LLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYN 518
Query: 209 IVLSAFKTGSQYSKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREK 30
+ ++ + +Y KALS + M+ K++PD T N++I K+ ++G+A+ M +
Sbjct: 519 SAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDL 578
Query: 29 RSQCSPDI 6
+ S ++
Sbjct: 579 KIPLSKEV 586
Score = 82.8 bits (203), Expect = 1e-13
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Frame = -3
Query: 527 NMMIRLHARHNQTDQARGLFFEMQKWR--CKPDAETYNAIISAHGRAGQWRWATNIMEDM 354
N++I + Q +A +F M++ R C PD T+ II + GQ M
Sbjct: 306 NIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTM 365
Query: 353 LRAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQY 174
L + P+ +YN LI A S G +EA V + +NG PD+V++ +L+A+ +
Sbjct: 366 LAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKP 425
Query: 173 SKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKRSQCSPDIV 3
KA+ FELM+ +P+ + N +I G +A++I H M +R+ P+IV
Sbjct: 426 EKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEM--ERNGVQPNIV 480
Score = 79.7 bits (195), Expect = 1e-12
Identities = 45/168 (26%), Positives = 84/168 (50%)
Frame = -3
Query: 530 YNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDML 351
YN I + + D+A L+ M+ + KPD TYN +IS + ++ A +++M+
Sbjct: 517 YNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMM 576
Query: 350 RAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYS 171
+P S+ Y+++I A G EA + +M G PD++T+ ++ A+ +
Sbjct: 577 DLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWE 636
Query: 170 KALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKR 27
KA + F M+ ++PD+ + ++ K GQ K + + MREK+
Sbjct: 637 KASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKK 684
Score = 76.6 bits (187), Expect = 8e-12
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Frame = -3
Query: 641 NYPILIKEISQTGSIEHCNQVFKWMKNQKNYCARNDI-YNMMIRLHARHNQTDQARGLFF 465
+Y L+ ++G E +VF+ M+ +N+C N + YN +I + +A +
Sbjct: 411 SYTSLLNAYGKSGKPEKAMKVFELMR--RNHCKPNLVSYNALIDAYGSKGLLTEAVEILH 468
Query: 464 EMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDMLRAAVPPSRSTYNNLIHACGSSG 285
EM++ +P+ + +++A GR GQ +++ + + + YN+ I + S G
Sbjct: 469 EMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVG 528
Query: 284 NWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYSKALSYFELMKGTKIRPDTTTLN 105
+ +AL + + M + PD VT+N+++S S+Y +AL + + M KI +
Sbjct: 529 EYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYS 588
Query: 104 IVIHCLVKLGQFGKAIDIFHSMREKRSQCSPDIV 3
VI K GQ +A +F M K C PD++
Sbjct: 589 SVICAYSKQGQVTEAESMFTKM--KMVGCRPDVI 620
Score = 62.4 bits (150), Expect = 2e-07
Identities = 37/134 (27%), Positives = 63/134 (47%)
Frame = -3
Query: 530 YNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDML 351
YN++I + ++ +A G EM + E Y+++I A+ + GQ A ++ M
Sbjct: 552 YNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMK 611
Query: 350 RAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYS 171
P TY +IHA + NW +A + M + + PD + + ++ AF G Q +
Sbjct: 612 MVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPA 671
Query: 170 KALSYFELMKGTKI 129
K L E M+ KI
Sbjct: 672 KVLVLAEFMREKKI 685
Score = 57.8 bits (138), Expect = 4e-06
Identities = 38/166 (22%), Positives = 80/166 (48%)
Frame = -3
Query: 536 DIYNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMED 357
++Y+ +I +++ Q +A +F +M+ C+PD TY A+I A+ A W A+ + +
Sbjct: 585 EVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLE 644
Query: 356 MLRAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQ 177
M V P ++L+ A G + L +++ M E I + + ++SA +
Sbjct: 645 METDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLRE 704
Query: 176 YSKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSM 39
+ + + +LM+ + LN ++H L K G+ + +F+ +
Sbjct: 705 WREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKI 750
>ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 483 bits (1242), Expect = e-134
Identities = 222/288 (77%), Positives = 261/288 (90%), Gaps = 2/288 (0%)
Frame = -3
Query: 860 GFVDYDKGERQVSVLVTGLKKSDLSKRDRLRVQGDRFQKDWAISELVSKILKLN--QRED 687
GFVDYD+G+ +VS ++GL+K D++ R RLRV G+RFQ DW +SE+ +L LN +D
Sbjct: 42 GFVDYDRGQHEVSTKISGLRKDDIAARYRLRVAGNRFQMDWTVSEVAELVLSLNLSDDDD 101
Query: 686 IDGLLNRWVGRFARKNYPILIKEISQTGSIEHCNQVFKWMKNQKNYCARNDIYNMMIRLH 507
+DGLLNRWVGRFARKN+P LIKE++Q GSIEHCN+VF+W+KNQKNY ARNDIYNMMIRLH
Sbjct: 102 VDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNRVFRWLKNQKNYRARNDIYNMMIRLH 161
Query: 506 ARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDMLRAAVPPSR 327
ARHN+TDQARGLFFEMQ+WRCKPD ETYNAII+AHGRAGQWRWA NIM+DMLRAA+PPSR
Sbjct: 162 ARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSR 221
Query: 326 STYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYSKALSYFEL 147
STYNNLI+ACGSSGNW+EAL V K+MTENG+GPDLVTHNI+LSAFK+G+QYSKALSYFEL
Sbjct: 222 STYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFEL 281
Query: 146 MKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKRSQCSPDIV 3
MKGT IRPDTTTLNIVIHCLVKL Q+ KAI+IF+SMREK+S+C+PD+V
Sbjct: 282 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVV 329
Score = 87.0 bits (214), Expect = 6e-15
Identities = 53/175 (30%), Positives = 86/175 (49%)
Frame = -3
Query: 530 YNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDML 351
YN I + D+A GL+ M+K + K D+ TY +IS + ++ A + ME+++
Sbjct: 506 YNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIM 565
Query: 350 RAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYS 171
+P S+ Y++ I A G EA M +G PD+VT+ +L A+ +
Sbjct: 566 HLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWE 625
Query: 170 KALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKRSQCSPDI 6
KA + FE M+ + I+ DT ++ K GQ G+ + + SMREK S I
Sbjct: 626 KAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTI 680
Score = 85.9 bits (211), Expect = 1e-14
Identities = 57/203 (28%), Positives = 107/203 (52%), Gaps = 2/203 (0%)
Frame = -3
Query: 629 LIKEISQTGSIEHCNQVFKWMKNQKNYCARNDI--YNMMIRLHARHNQTDQARGLFFEMQ 456
+I S G +E+C F M + + +I YN +I +A ++A F E++
Sbjct: 334 IIHLYSVCGQVENCEAAFNMMIAEG---LKPNIVSYNALIGAYAARGMDNEAHLFFNEIK 390
Query: 455 KWRCKPDAETYNAIISAHGRAGQWRWATNIMEDMLRAAVPPSRSTYNNLIHACGSSGNWR 276
+ +PD +Y ++++A+GR+ + A I + M R + P+ +YN LI A GS+G
Sbjct: 391 QNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLA 450
Query: 275 EALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYSKALSYFELMKGTKIRPDTTTLNIVI 96
+A+K+ + M + GI P++V+ +L+A S+ K + + I+ +T N I
Sbjct: 451 DAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAI 510
Query: 95 HCLVKLGQFGKAIDIFHSMREKR 27
+ +G++ KAI ++ SMR+K+
Sbjct: 511 GSCMNVGEYDKAIGLYKSMRKKK 533
Score = 72.8 bits (177), Expect = 1e-10
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 2/177 (1%)
Frame = -3
Query: 527 NMMIRLHARHNQTDQARGLFFEMQ--KWRCKPDAETYNAIISAHGRAGQWRWATNIMEDM 354
N++I + Q D+A +F M+ K C PD T+ +II + GQ M
Sbjct: 295 NIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMM 354
Query: 353 LRAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQY 174
+ + P+ +YN LI A + G EA + +NG PD+V++ +L+A+ +
Sbjct: 355 IAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 414
Query: 173 SKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKRSQCSPDIV 3
KA F+ MK K++P+ + N +I G AI I M ++ Q P++V
Sbjct: 415 HKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQ--PNVV 469
>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 855
Score = 478 bits (1231), Expect = e-133
Identities = 222/307 (72%), Positives = 265/307 (86%), Gaps = 1/307 (0%)
Frame = -3
Query: 920 PKTKSLLRCCSGEANTK-RLVGFVDYDKGERQVSVLVTGLKKSDLSKRDRLRVQGDRFQK 744
PK+ + + S E K + GFVDYD+G QVS ++GL+K D+ RLRV G+RFQK
Sbjct: 22 PKSTTTRKKSSNEVAFKEKKDGFVDYDRGHHQVSTKISGLRKEDIPAHYRLRVAGNRFQK 81
Query: 743 DWAISELVSKILKLNQREDIDGLLNRWVGRFARKNYPILIKEISQTGSIEHCNQVFKWMK 564
DW +SE+V +L L R+DI+GLLNRW+GRFARKN+P LI+E++Q GSIEHCN VF WMK
Sbjct: 82 DWTVSEVVDSVLSLTLRDDIEGLLNRWIGRFARKNFPFLIRELTQRGSIEHCNLVFSWMK 141
Query: 563 NQKNYCARNDIYNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQW 384
NQKNYCAR DIYNMMIRLHARHN+TDQARGLFFEMQK RCKPDAETYNA+I+AHGRAGQW
Sbjct: 142 NQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQW 201
Query: 383 RWATNIMEDMLRAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIV 204
RWA NIM+DMLRAA+PPSRSTYNNLI+ACGSSGNW+EAL V K+MT+NG+GPDLVTHNI+
Sbjct: 202 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIM 261
Query: 203 LSAFKTGSQYSKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKRS 24
L+AFK+G+QYSKALSYFEL+KGT IRPDTTT NI+IHCLVKL Q+ KA+DIF+SM+EK+S
Sbjct: 262 LTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKS 321
Query: 23 QCSPDIV 3
+C PD+V
Sbjct: 322 ECHPDVV 328
Score = 84.0 bits (206), Expect = 5e-14
Identities = 55/203 (27%), Positives = 110/203 (54%), Gaps = 2/203 (0%)
Frame = -3
Query: 629 LIKEISQTGSIEHCNQVFKWMKNQKNYCARNDI--YNMMIRLHARHNQTDQARGLFFEMQ 456
+I S G IE+C F M + + +I YN ++ +A ++A +F E++
Sbjct: 333 MIHLYSVCGHIENCEAAFNMMLAEG---LKPNIVSYNALLGAYAARGMENEALQVFNEIK 389
Query: 455 KWRCKPDAETYNAIISAHGRAGQWRWATNIMEDMLRAAVPPSRSTYNNLIHACGSSGNWR 276
+ +PD +Y ++++A+GR+ + + A I + + R + P+ +YN LI A GS+G
Sbjct: 390 QNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLE 449
Query: 275 EALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYSKALSYFELMKGTKIRPDTTTLNIVI 96
+A+++ + M ++ I P++V+ +L+A Q K + + I+ +T N I
Sbjct: 450 DAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAI 509
Query: 95 HCLVKLGQFGKAIDIFHSMREKR 27
+ +G++ KAID+++SMR+K+
Sbjct: 510 GSYINVGEYDKAIDLYNSMRKKK 532
Score = 79.7 bits (195), Expect = 1e-12
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 4/171 (2%)
Frame = -3
Query: 530 YNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDML 351
YN I + + D+A L+ M+K + K D+ TY +IS + ++ A + ME+M+
Sbjct: 505 YNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMM 564
Query: 350 RAAVPPSRSTYNNLIHA----CGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTG 183
+P S+ Y+++I A + G EA M G PD+VT+ +L A+
Sbjct: 565 HLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAA 624
Query: 182 SQYSKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREK 30
++ K + FE M+ ++ DT ++ K GQ G+ + + SMREK
Sbjct: 625 EKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSMREK 675
Score = 79.0 bits (193), Expect = 2e-12
Identities = 51/212 (24%), Positives = 97/212 (45%)
Frame = -3
Query: 641 NYPILIKEISQTGSIEHCNQVFKWMKNQKNYCARNDIYNMMIRLHARHNQTDQARGLFFE 462
+Y L+ + G QVF +K Q + Y ++ + R + +AR +F
Sbjct: 364 SYNALLGAYAARGMENEALQVFNEIK-QNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKM 422
Query: 461 MQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDMLRAAVPPSRSTYNNLIHACGSSGN 282
+++ KP+ +YNA+I A+G G A I+ +M + + P+ + L+ ACG G
Sbjct: 423 IKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQ 482
Query: 281 WREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYSKALSYFELMKGTKIRPDTTTLNI 102
+ V GI + V +N + ++ +Y KA+ + M+ KI+ D+ T +
Sbjct: 483 KVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTV 542
Query: 101 VIHCLVKLGQFGKAIDIFHSMREKRSQCSPDI 6
+I K+ +FG+A+ M + S ++
Sbjct: 543 LISGCCKMSKFGEALSFMEEMMHLKLPMSKEV 574
Score = 73.6 bits (179), Expect = 7e-11
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 2/170 (1%)
Frame = -3
Query: 530 YNMMIRLHARHNQTDQARGLFFEMQ--KWRCKPDAETYNAIISAHGRAGQWRWATNIMED 357
+N++I + Q D+A +F M+ K C PD T+ ++I + G
Sbjct: 293 HNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNM 352
Query: 356 MLRAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQ 177
ML + P+ +YN L+ A + G EAL+V + +NG PD+V++ +L+A+ +
Sbjct: 353 MLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRK 412
Query: 176 YSKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKR 27
KA F+++K ++P+ + N +I G AI+I M + +
Sbjct: 413 PQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDK 462
>ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531022|gb|EEF32875.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 808
Score = 478 bits (1229), Expect = e-132
Identities = 230/315 (73%), Positives = 267/315 (84%), Gaps = 5/315 (1%)
Frame = -3
Query: 932 LPHKPKTKSLLRCCSGEANT----KRLVGFVDYDKGERQVSVLVTGLKKSDLSKRDRLRV 765
L H P + C N ++ GFVDYD G+ QVS VTG +K DL KR RL+V
Sbjct: 7 LCHPPLVSNFKLHCKKAKNDVAFQEKKSGFVDYDTGQHQVSTQVTGFRKCDLQKRYRLKV 66
Query: 764 QGDRFQKDWAISELVSKILKLNQR-EDIDGLLNRWVGRFARKNYPILIKEISQTGSIEHC 588
GDRFQ+DW +S++VSKIL+LN + +D++ +LN W+GRFARKN+P LIKEI+Q G++EH
Sbjct: 67 GGDRFQRDWTLSQVVSKILELNPKYDDVEVVLNHWIGRFARKNFPRLIKEITQRGALEHS 126
Query: 587 NQVFKWMKNQKNYCARNDIYNMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIIS 408
N VF+WMK QKNYCAR D+YNMMIRLHARHN TDQARGLFFEMQ+WRCKPD+ETYNA+I+
Sbjct: 127 NLVFRWMKLQKNYCARTDMYNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALIN 186
Query: 407 AHGRAGQWRWATNIMEDMLRAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGP 228
AHGRAGQWRWA NIMEDMLR A+PPSRSTYNNLI+ACGSSGNWREALKVSK+MTENG+GP
Sbjct: 187 AHGRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGP 246
Query: 227 DLVTHNIVLSAFKTGSQYSKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIF 48
DLVTHNIVLSA+KTG+QYSKALSYFELMKGT IRPDTTT NIVI+CLVKLGQ KAIDIF
Sbjct: 247 DLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIF 306
Query: 47 HSMREKRSQCSPDIV 3
+SMREKR++C PDIV
Sbjct: 307 NSMREKRAECRPDIV 321
Score = 91.3 bits (225), Expect = 3e-16
Identities = 59/243 (24%), Positives = 116/243 (47%), Gaps = 35/243 (14%)
Frame = -3
Query: 629 LIKEISQTGSIEHCNQVFKWMKNQKNYCARNDIYNMMIRLHARHNQTDQARGLFFEMQKW 450
+I S +G +E+C VF M + YN +I +A H +++A +F +++
Sbjct: 326 IIHLYSLSGQVENCKAVFSTMLAE-GLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKAS 384
Query: 449 RCKPDAETYNAIISAHGRAGQWRWATNIMEDMLRAAVPPSRSTYNNLIHACGSSGNWREA 270
PD +Y +++S++GR+ Q + A + M +A + P+ ++N LI A GS+G +A
Sbjct: 385 GLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADA 444
Query: 269 LKVSKRMTENGIGPDLVTH-----------------------------------NIVLSA 195
+KV + M ++GI P++VT N + +
Sbjct: 445 VKVLREMEQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGS 504
Query: 194 FKTGSQYSKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREKRSQCS 15
+ +Y KA++ + M+ K+ P++ T ++I K+ ++GKAI+ F M E + +
Sbjct: 505 YMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALT 564
Query: 14 PDI 6
++
Sbjct: 565 KEV 567
Score = 81.3 bits (199), Expect = 3e-13
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Frame = -3
Query: 527 NMMIRLHARHNQTDQARGLFFEMQKWR--CKPDAETYNAIISAHGRAGQWRWATNIMEDM 354
N++I + Q ++A +F M++ R C+PD T+ +II + +GQ + M
Sbjct: 287 NIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTM 346
Query: 353 LRAAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQY 174
L + P+ +YN LI A G EAL V K++ +G+ PD+V++ +LS++ Q
Sbjct: 347 LAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQP 406
Query: 173 SKALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMRE 33
KA F +MK K++P+ + N +I G A+ + M +
Sbjct: 407 KKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQ 453
Score = 66.2 bits (160), Expect = 1e-08
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 2/218 (0%)
Frame = -3
Query: 650 ARKNYPILIKEISQTGSIEHCNQVFKWMKNQKNYCARNDIYNMMIRLHARHNQTDQARGL 471
+R Y LI +G+ +V K M + +N+++ + Q +A
Sbjct: 212 SRSTYNNLINACGSSGNWREALKVSKQM-TENGVGPDLVTHNIVLSAYKTGAQYSKALSY 270
Query: 470 FFEMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDML--RAAVPPSRSTYNNLIHAC 297
F M+ +PD T N +I + GQ A +I M RA P T+ ++IH
Sbjct: 271 FELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTFTSIIHLY 330
Query: 296 GSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYSKALSYFELMKGTKIRPDT 117
SG V M G+ P +V++N ++ A+ +ALS F+ +K + + PD
Sbjct: 331 SLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDV 390
Query: 116 TTLNIVIHCLVKLGQFGKAIDIFHSMREKRSQCSPDIV 3
+ ++ + Q KA ++F+ M K+++ P++V
Sbjct: 391 VSYTSLLSSYGRSKQPKKAREMFNMM--KKAKLKPNVV 426
Score = 61.6 bits (148), Expect = 3e-07
Identities = 38/166 (22%), Positives = 74/166 (44%)
Frame = -3
Query: 527 NMMIRLHARHNQTDQARGLFFEMQKWRCKPDAETYNAIISAHGRAGQWRWATNIMEDMLR 348
N I + + ++A L+ M+K + P++ TY +IS + ++ A DM+
Sbjct: 499 NSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADMME 558
Query: 347 AAVPPSRSTYNNLIHACGSSGNWREALKVSKRMTENGIGPDLVTHNIVLSAFKTGSQYSK 168
+ ++ +++I A G EA + M G PD++T +L A+ G + K
Sbjct: 559 LKIALTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAYNAGEHWGK 618
Query: 167 ALSYFELMKGTKIRPDTTTLNIVIHCLVKLGQFGKAIDIFHSMREK 30
A + M+ I+ DT + ++ K G + + + M+EK
Sbjct: 619 ACDLIQEMEDYDIQLDTIACSALMRAFNKRGNPSQVLILAEFMKEK 664