BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042138
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexic...    77   1e-12
gb|ADB85273.1| putative retrotransposon protein [Phyllostachys e...    75   6e-12
gb|ABC94893.1| polyprotein [Oryza australiensis]                       73   2e-11
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...    70   2e-10
emb|CAA73042.1| polyprotein [Ananas comosus]                           70   2e-10

>gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexicana]
          Length = 1604

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/107 (41%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3    DALSRKA-VGQISSLFVSTQLATEIDRLGLEIYLESDQNLLYTLTVEPTLISRIKEAQKD 179
            DALSRK+ V  + +  +  +LA E DRL L  +L + + +  T+ +EPTL   IKEAQK+
Sbjct: 1081 DALSRKSQVNLMVARPMPYELAKEFDRLSLG-FLNNSRGV--TVELEPTLEREIKEAQKN 1137

Query: 180  AGELWAIQDLMSEGKQPEFRVDDSGILWYRDRLCVPDVSELKEAVLK 320
              ++  I+ L+ +G+  +FR D  G++W++DRLCVP+V  ++E +LK
Sbjct: 1138 DEKISEIRRLILDGRGKDFREDAEGVVWFKDRLCVPNVQSIRELILK 1184


>gb|ADB85273.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 897

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   DALSRKAVGQISSLFVST---QLATEIDRLGLEIYLESDQNLLYTLTVEPTLISRIKEAQ 173
           DALSRK  G  S+L V     +L  E+ RL LEI    +Q+ +Y L VEPT+  +I+E Q
Sbjct: 363 DALSRK--GYCSTLLVQENQPKLYEEMRRLNLEIV---NQDCVYALEVEPTVQRQIRENQ 417

Query: 174 KDAGELWAIQDLMSEGKQPEFRVDDSGILWYRDRLCVPDVSELKEAVLK 320
               +L  I+D +   K P F  D+ GILW+ +RLCVPD   +K+ +LK
Sbjct: 418 ATDKDLQEIKDNLKREKAPGFSEDEEGILWFGNRLCVPDCQAIKQLLLK 466


>gb|ABC94893.1| polyprotein [Oryza australiensis]
          Length = 1469

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3    DALSRKAVGQISSLF-VSTQLATEIDRLGLEIYLESDQNLLYTLTVEPTLISRIKEAQKD 179
            DALSRKA      L  ++++L  E+ +L L +    + N   +L V P L ++I+EAQ+ 
Sbjct: 947  DALSRKAQCNHMGLGNMASELQEEMAKLNLHLIPHGEVN---SLEVRPLLRTQIEEAQRG 1003

Query: 180  AGELWAIQDLMSEGKQPEFRVDDSGILWYRDRLCVPDVSELKEAVLK 320
              E   I++ M+ G+  EF VDD GILWY+ R+CVP+   L+E +LK
Sbjct: 1004 NEETQEIKERMAAGRAQEFSVDDKGILWYKKRICVPERGGLRELILK 1050


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3    DALSRKA-VGQISSLFVSTQLATEIDRLGLEIYLESDQNLLYTLTVEPTLISRIKEAQKD 179
            DALSRK+    +    +  +L  +++ L L I     +  L TL  +PTL+ +I+EAQK+
Sbjct: 1916 DALSRKSHCNTLGVRGIPPELNQQMEALNLSIV---SRGFLATLEAKPTLLDQIREAQKN 1972

Query: 180  AGELWAIQDLMSEGKQPEFRVDDSGILWYRDRLCVPDVSELKEAVLK 320
              ++  +   M +GK   F  D+ G LW R+R+CVPDV ELK+ +L+
Sbjct: 1973 DPDMRGLLKNMKQGKAAGFIEDEHGTLWNRNRVCVPDVRELKQLILQ 2019


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   DALSRKAVGQISSLFVST-QLATEIDRLGLEIYLESDQNLLYTLTVEPTLISRIKEAQKD 179
           DALSRK++  ++   V+  +L  ++ RL LEI        L TL V+PTL+ RIKE Q  
Sbjct: 423 DALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTPDTPMRLMTLVVQPTLLDRIKEKQAS 482

Query: 180 AGELWAIQDLMSEGKQPEFRVDDSGILWYRDRLCVPDVSELKEAVLK 320
             EL  I+  M +G   +F +D  G++ +R R+CVP  S +KE +L+
Sbjct: 483 DVELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICVPADSGIKEDILQ 529