BLASTX nr result

ID: Atractylodes22_contig00042087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042087
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi...   245   3e-63
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...   216   1e-54
emb|CBI36299.3| unnamed protein product [Vitis vinifera]              216   2e-54
ref|XP_002517613.1| pentatricopeptide repeat-containing protein,...   212   2e-53
ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-51

>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Vitis vinifera]
          Length = 405

 Score =  245 bits (625), Expect = 3e-63
 Identities = 114/150 (76%), Positives = 133/150 (88%)
 Frame = -2

Query: 451 FDVKLDVVSVNIVIDALCRMGIPDKAYVIMGEMEKSGITPDVITYTTLISAFYKLNRAEI 272
           F ++LDV SVNIVI ALC M I +KAY++M EMEK+G+ PDV+TYTTLISAFYK NR E+
Sbjct: 175 FGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRWEV 234

Query: 271 GNGLWNLMVMRGCLPNPATFNARVQFLVNRGRVWQANSLMGMMRYLGITPDEVTFNLVIK 92
           GNGLWNLMVM+GCLPN ATFN R+Q+LVNR R WQANSLMGMM YLGITPDEVT+NLVIK
Sbjct: 235 GNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIK 294

Query: 91  GFCRAGYIDMAKRVYSALHDEGYKPNARIY 2
           GFC+AGY++MAK+VYSALH +GYKPN +IY
Sbjct: 295 GFCQAGYLEMAKKVYSALHGKGYKPNVKIY 324


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
           gi|449484169|ref|XP_004156805.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
          Length = 399

 Score =  216 bits (551), Expect = 1e-54
 Identities = 100/150 (66%), Positives = 121/150 (80%)
 Frame = -2

Query: 451 FDVKLDVVSVNIVIDALCRMGIPDKAYVIMGEMEKSGITPDVITYTTLISAFYKLNRAEI 272
           FD++LD++SVNI++ A C  G  ++AY++M EMEK GI PDV+TYTTLISA YK  ++EI
Sbjct: 170 FDIELDIISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEI 229

Query: 271 GNGLWNLMVMRGCLPNPATFNARVQFLVNRGRVWQANSLMGMMRYLGITPDEVTFNLVIK 92
            NGLWNLMV+RGCLPN  TFN R+Q L+ R R W AN LM MMR +GI PDEVT+NLVIK
Sbjct: 230 SNGLWNLMVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIK 289

Query: 91  GFCRAGYIDMAKRVYSALHDEGYKPNARIY 2
           GFC+AG +DMAKRVYSALH  GYKPN +IY
Sbjct: 290 GFCQAGLLDMAKRVYSALHGSGYKPNVKIY 319


>emb|CBI36299.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  216 bits (550), Expect = 2e-54
 Identities = 101/133 (75%), Positives = 118/133 (88%)
 Frame = -2

Query: 451 FDVKLDVVSVNIVIDALCRMGIPDKAYVIMGEMEKSGITPDVITYTTLISAFYKLNRAEI 272
           F ++LDV SVNIVI ALC M I +KAY++M EMEK+G+ PDV+TYTTLISAFYK NR E+
Sbjct: 175 FGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRWEV 234

Query: 271 GNGLWNLMVMRGCLPNPATFNARVQFLVNRGRVWQANSLMGMMRYLGITPDEVTFNLVIK 92
           GNGLWNLMVM+GCLPN ATFN R+Q+LVNR R WQANSLMGMM YLGITPDEVT+NLVIK
Sbjct: 235 GNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIK 294

Query: 91  GFCRAGYIDMAKR 53
           GFC+AGY++MAK+
Sbjct: 295 GFCQAGYLEMAKK 307


>ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543245|gb|EEF44777.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  212 bits (540), Expect = 2e-53
 Identities = 99/150 (66%), Positives = 125/150 (83%)
 Frame = -2

Query: 451 FDVKLDVVSVNIVIDALCRMGIPDKAYVIMGEMEKSGITPDVITYTTLISAFYKLNRAEI 272
           FD+ LD+ SVNI+I A C+M I DKAY++M +ME+ GI PDV+TYTTLISAFYK +R EI
Sbjct: 171 FDIILDIFSVNIIIKAFCKMSILDKAYLVMIQMERLGIRPDVVTYTTLISAFYKNDRWEI 230

Query: 271 GNGLWNLMVMRGCLPNPATFNARVQFLVNRGRVWQANSLMGMMRYLGITPDEVTFNLVIK 92
            NGLWNLMV++GCLPN +TFN R+Q LVN  + WQAN +M +M  +GI+PDEVT+NLVIK
Sbjct: 231 SNGLWNLMVLKGCLPNLSTFNVRIQHLVNIRQSWQANEVMLLMERIGISPDEVTYNLVIK 290

Query: 91  GFCRAGYIDMAKRVYSALHDEGYKPNARIY 2
           GF +AGY++MA+RVYSALH +GYKPN +IY
Sbjct: 291 GFGQAGYLEMARRVYSALHGKGYKPNVKIY 320


>ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|222840687|gb|EEE78234.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  204 bits (520), Expect = 5e-51
 Identities = 95/150 (63%), Positives = 121/150 (80%)
 Frame = -2

Query: 451 FDVKLDVVSVNIVIDALCRMGIPDKAYVIMGEMEKSGITPDVITYTTLISAFYKLNRAEI 272
           FD++LD+ SVNI++ ALC  G  DKAY++M EMEKSG+ PDVITYTTL+SAFYK NR+EI
Sbjct: 172 FDIELDIFSVNIIVKALCETGNLDKAYLLMVEMEKSGVRPDVITYTTLMSAFYKNNRSEI 231

Query: 271 GNGLWNLMVMRGCLPNPATFNARVQFLVNRGRVWQANSLMGMMRYLGITPDEVTFNLVIK 92
           GNGLWNLMV++GCLPN ATFN R+Q+LVN  R W AN +M +M  +GI PDEVT+NLVIK
Sbjct: 232 GNGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHANDVMRLMLKIGIVPDEVTYNLVIK 291

Query: 91  GFCRAGYIDMAKRVYSALHDEGYKPNARIY 2
           GF + G ++MAK VY +L  +G+K N ++Y
Sbjct: 292 GFFQTGKLEMAKMVYFSLRGKGHKFNVKVY 321


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