BLASTX nr result

ID: Atractylodes22_contig00042054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042054
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05702.1| reverse transcriptase - beet retrotransposon, put...    78   7e-13
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    77   2e-12
ref|XP_003598883.1| hypothetical protein MTR_3g022950 [Medicago ...    76   3e-12
gb|ABN08665.1| reverse transcriptase - beet retrotransposon, put...    74   1e-11
ref|XP_003625892.1| hypothetical protein MTR_7g108440 [Medicago ...    72   5e-11

>gb|ABN05702.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 384

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
 Frame = +1

Query: 31  ASLWRDSEFGFAFLPSIGRSGGLFSVWDSSIFKADQAVRGDGFLGVTGFVQGKREKVGIL 210
           AS+W + +F +AFLPS   SGG+ S+W  S+        G+GF+GV      K+ K  I+
Sbjct: 10  ASIWGNDDFDWAFLPSESNSGGILSIWRKSMATLYYTFTGEGFVGVFLEWGAKKIKCIII 69

Query: 211 NVYGPQESTKKEAMWKTLSSTMDSVKA-AWCLLGDFNVVRTMDERR 345
           NVY   +   K+ +W+ L     +++  AWC+L DFNVV   +ERR
Sbjct: 70  NVYSKCDLQSKKRLWERLVLARTNLERWAWCILRDFNVVGEREERR 115


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
 Frame = +1

Query: 34   SLWRDSEFGFAFLPSIGRSGGLFSVWDSSIFKADQAVRGDGFLGVTGFVQGKREKVGILN 213
            S+W DS   + F+PS+  SGGL  +W++S F+ ++ ++G  F+ + G    + + + I+N
Sbjct: 692  SIWGDSSVSWDFVPSVQASGGLLCMWNNSHFQVERRIKGGSFIMLEGKWVEEDQWIQIVN 751

Query: 214  VYGPQESTKKEAMWKTLSSTMDSVKAA-----WCLLGDFNVVRTMDER 342
            +Y P +   K  +W  L      +KAA     WC LGDFN VR+ +ER
Sbjct: 752  IYAPCDLAGKRTLWNELR----HLKAANPTGLWCFLGDFNSVRSQEER 795


>ref|XP_003598883.1| hypothetical protein MTR_3g022950 [Medicago truncatula]
            gi|355487931|gb|AES69134.1| hypothetical protein
            MTR_3g022950 [Medicago truncatula]
          Length = 840

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1    KTTGFEDYAVASLWRDSEFGFAFLPSIGRSGGLFSVWDSSIFKADQAVRGDGFLGVTGFV 180
            K +   D     LW D+   F+F PS G SGGL ++W+    +   +   D  LG+ G  
Sbjct: 689  KLSVVNDIVCKGLWNDNHVDFSFQPSSGASGGLITLWNCEEVEVWSSFNFDHVLGIQGQF 748

Query: 181  QGKREKVGILNVYGPQESTKKEAMWKTLSSTMDS-VKAAWCLLGDFNVVRTMDERRN 348
                +K  ILNVY P +  +++ +W  +S+ + S ++   C+ GDFN VR  +ERR+
Sbjct: 749  VKSGDKFTILNVYAPCDFNRQQVLWHNISARLTSLLEENVCVCGDFNAVRCPEERRS 805


>gb|ABN08665.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 152

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
 Frame = +1

Query: 16  EDYAVASLWRDSEFGFAFLPSIGRSGGLFSVWDSSIFKADQAVRGDGFLGVTGFVQGKRE 195
           +++   S+W  +   F+F  S+G SGG+ +VWD S+      V     L + G      +
Sbjct: 43  DEFLCRSIWGPTPMAFSFKSSVGASGGIITVWDPSVLDVWMTVNIANCLMIKGSFLKNND 102

Query: 196 KVGILNVYGPQESTKKEAMWKTLSS-TMDSVKAAWCLLGDFNVVRTMDER 342
              + N+Y P     ++ +W+ +S+  +     AWC+LGDFNVVR+ +ER
Sbjct: 103 MFCLANIYAPSNIRGRQMLWEAVSNFLLSHGDVAWCVLGDFNVVRSCEER 152


>ref|XP_003625892.1| hypothetical protein MTR_7g108440 [Medicago truncatula]
           gi|355500907|gb|AES82110.1| hypothetical protein
           MTR_7g108440 [Medicago truncatula]
          Length = 848

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
 Frame = +1

Query: 7   TGFEDYAVA---SLWRDSEFGFAFLPSIGRSGGLFSVWDSSIFKADQAVRGDGFLGVTGF 177
           T  ED + A   +LW   +  + F PS G SGG+ S+W  S         GDG++GV   
Sbjct: 602 TKLEDISSALCYNLWGSDDCQWYFHPSEGNSGGILSLWRKSYANEVSCFGGDGYVGVCFE 661

Query: 178 VQGKREKVGILNVYGPQESTKKEAMWKT-LSSTMDSVKAAWCLLGDFNVVRTMDER 342
               R K  ++NVY   +S  K  +W+  L         AWC+LGDFNVV   DER
Sbjct: 662 WGVLRHKCIVINVYVKCDSMSKRRLWEAILEERCQRGNGAWCVLGDFNVVANSDER 717


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