BLASTX nr result

ID: Atractylodes22_contig00042023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042023
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33630.1| unknown [Lotus japonicus]                              104   6e-21
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...    96   3e-18
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...    96   4e-18
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]    96   4e-18

>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score =  104 bits (260), Expect = 6e-21
 Identities = 48/79 (60%), Positives = 62/79 (78%)
 Frame = +3

Query: 6   DDGKCGEQVHAHAIKLGLASKSYVQCGLVNMYGKSGLIKDAKRVFNMNGSLPNNACWNAM 185
           D G+CGEQVHA A+KLGLAS +YVQC L+ MYG+SGL++DAK+VF  + S  N   WNAM
Sbjct: 249 DHGRCGEQVHADAMKLGLASDNYVQCSLIAMYGRSGLLRDAKQVFETSRSERNVDSWNAM 308

Query: 186 LSSFIQNGCHGEAIKFLYQ 242
           L  +++NG + EA+KFLYQ
Sbjct: 309 LMGYLENGLYIEAVKFLYQ 327


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/76 (61%), Positives = 56/76 (73%)
 Frame = +3

Query: 15  KCGEQVHAHAIKLGLASKSYVQCGLVNMYGKSGLIKDAKRVFNMNGSLPNNACWNAMLSS 194
           +CGEQVH  AIKLGL S  YVQC L+ MYG+ GL++DAKRVF M+       CWNAML  
Sbjct: 319 RCGEQVHVDAIKLGLVSDHYVQCSLIAMYGRCGLLEDAKRVFEMSQEERKVDCWNAMLMG 378

Query: 195 FIQNGCHGEAIKFLYQ 242
           +IQNG + EA+KFLYQ
Sbjct: 379 YIQNGLYIEAVKFLYQ 394


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/77 (61%), Positives = 57/77 (74%)
 Frame = +3

Query: 12  GKCGEQVHAHAIKLGLASKSYVQCGLVNMYGKSGLIKDAKRVFNMNGSLPNNACWNAMLS 191
           G CGEQVHA AIKLGL S SYVQC L+ MYG+SGL++DA+ VF M  +  N    NAML 
Sbjct: 313 GSCGEQVHADAIKLGLDSDSYVQCSLIAMYGRSGLLRDAELVFEMTRNERNVDSLNAMLM 372

Query: 192 SFIQNGCHGEAIKFLYQ 242
            +IQNG + EA+KF+YQ
Sbjct: 373 GYIQNGLYIEAVKFVYQ 389


>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/81 (56%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
 Frame = +3

Query: 6   DDGKCGEQVHAHAIKLGLASKSYVQCGLVNMYGKSGLIKDAKRVFN--MNGSLPNNACWN 179
           D G+CG  +HA  IKLGL S  YVQCGLV+MYGK GL+ +A+RVF    + +  N  CWN
Sbjct: 300 DHGRCGRLIHASTIKLGLESDIYVQCGLVDMYGKCGLLVEARRVFETVSDTNKTNIVCWN 359

Query: 180 AMLSSFIQNGCHGEAIKFLYQ 242
           AML+ +I++G + EAIKFLYQ
Sbjct: 360 AMLTGYIRHGLYIEAIKFLYQ 380


>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
          Length = 543

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/81 (56%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
 Frame = +3

Query: 6   DDGKCGEQVHAHAIKLGLASKSYVQCGLVNMYGKSGLIKDAKRVFN--MNGSLPNNACWN 179
           D G+CG  +HA  IKLGL S  YVQCGLV+MYGK GL+ +A+RVF    + +  N  CWN
Sbjct: 429 DHGRCGRLIHASTIKLGLESDIYVQCGLVDMYGKCGLLVEARRVFETVSDTNKTNIVCWN 488

Query: 180 AMLSSFIQNGCHGEAIKFLYQ 242
           AML+ +I++G + EAIKFLYQ
Sbjct: 489 AMLTGYIRHGLYIEAIKFLYQ 509


Top