BLASTX nr result

ID: Atractylodes22_contig00041933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041933
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...    79   4e-13
emb|CBI35690.3| unnamed protein product [Vitis vinifera]               79   4e-13
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]    79   4e-13
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...    71   1e-10
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...    71   1e-10

>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
           [Vitis vinifera]
          Length = 860

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/80 (57%), Positives = 50/80 (62%)
 Frame = -3

Query: 241 NMREKLKDKIRISYYSTPSERCSPLAVLHTITSPTTGVCLKMECSNTIXXXXXXXXXXXX 62
           N   +L  +IRIS+YS PSERC PLAVLHTITS   GVC KME S               
Sbjct: 22  NQGLELMKEIRISHYSQPSERCPPLAVLHTITS--CGVCFKMESSKAQSQDTPLYLLHST 79

Query: 61  XLRENKTAVASLGGEELHLV 2
            +RENKTAV SLG EELHLV
Sbjct: 80  CIRENKTAVMSLGEEELHLV 99


>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/80 (57%), Positives = 50/80 (62%)
 Frame = -3

Query: 241 NMREKLKDKIRISYYSTPSERCSPLAVLHTITSPTTGVCLKMECSNTIXXXXXXXXXXXX 62
           N   +L  +IRIS+YS PSERC PLAVLHTITS   GVC KME S               
Sbjct: 22  NQGLELMKEIRISHYSQPSERCPPLAVLHTITS--CGVCFKMESSKAQSQDTPLYLLHST 79

Query: 61  XLRENKTAVASLGGEELHLV 2
            +RENKTAV SLG EELHLV
Sbjct: 80  CIRENKTAVMSLGEEELHLV 99


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/80 (57%), Positives = 50/80 (62%)
 Frame = -3

Query: 241 NMREKLKDKIRISYYSTPSERCSPLAVLHTITSPTTGVCLKMECSNTIXXXXXXXXXXXX 62
           N   +L  +IRIS+YS PSERC PLAVLHTITS   GVC KME S               
Sbjct: 22  NQGLELMKEIRISHYSQPSERCPPLAVLHTITS--CGVCFKMESSKAQSQDTPLYLLHST 79

Query: 61  XLRENKTAVASLGGEELHLV 2
            +RENKTAV SLG EELHLV
Sbjct: 80  CIRENKTAVMSLGEEELHLV 99


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/82 (52%), Positives = 51/82 (62%)
 Frame = -3

Query: 247 NLNMREKLKDKIRISYYSTPSERCSPLAVLHTITSPTTGVCLKMECSNTIXXXXXXXXXX 68
           N N    +K+ IRIS++S PSERC PLAVLHT+TS   GVC KME  +            
Sbjct: 30  NYNKNFHVKE-IRISHFSQPSERCPPLAVLHTVTS--CGVCFKME--SKTQQQDGLFQLH 84

Query: 67  XXXLRENKTAVASLGGEELHLV 2
              +RENKTAV  LGGEE+HLV
Sbjct: 85  SLCIRENKTAVMPLGGEEIHLV 106


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 954

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/82 (51%), Positives = 50/82 (60%)
 Frame = -3

Query: 247 NLNMREKLKDKIRISYYSTPSERCSPLAVLHTITSPTTGVCLKMECSNTIXXXXXXXXXX 68
           N N +     +IRIS++S PSERC PLAVLHT+TS   GVC KME  +            
Sbjct: 23  NNNYKNFHVKEIRISHFSQPSERCPPLAVLHTVTS--CGVCFKME--SKTQQQDGLFQLH 78

Query: 67  XXXLRENKTAVASLGGEELHLV 2
              +RENKTAV  LGGEE+HLV
Sbjct: 79  SLCIRENKTAVMPLGGEEIHLV 100


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