BLASTX nr result

ID: Atractylodes22_contig00041913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041913
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26377.3| unnamed protein product [Vitis vinifera]               92   3e-17
emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]    92   3e-17
ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...    92   6e-17
ref|XP_003620319.1| Pentatricopeptide repeat-containing protein ...    88   8e-16
gb|ACU33853.1| PPR1 protein [Capsicum annuum]                          87   2e-15

>emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/79 (54%), Positives = 56/79 (70%)
 Frame = +3

Query: 3   FDELSSKGLKPDTRTYTVMIRVYCEDGLFGKAKELLTKMEENGCLPNSVTYNVIVQEFLK 182
           FDE+S  GL+PDT  Y ++I   C  G+  +A +LL +MEE GCLP+S+T+NVI+Q  LK
Sbjct: 449 FDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK 508

Query: 183 QNECREAEILLEEMINRGF 239
           +NE  EA  LLEEM NR F
Sbjct: 509 ENEIHEAIQLLEEMRNRNF 527


>emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/79 (54%), Positives = 56/79 (70%)
 Frame = +3

Query: 3    FDELSSKGLKPDTRTYTVMIRVYCEDGLFGKAKELLTKMEENGCLPNSVTYNVIVQEFLK 182
            FDE+S  GL+PDT  Y ++I   C  G+  +A +LL +MEE GCLP+S+T+NVI+Q  LK
Sbjct: 1388 FDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK 1447

Query: 183  QNECREAEILLEEMINRGF 239
            +NE  EA  LLEEM NR F
Sbjct: 1448 ENEIHEAIQLLEEMRNRNF 1466


>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/79 (53%), Positives = 56/79 (70%)
 Frame = +3

Query: 3   FDELSSKGLKPDTRTYTVMIRVYCEDGLFGKAKELLTKMEENGCLPNSVTYNVIVQEFLK 182
           F +LSSKGL PD RTYT+MI   C+ GL  +A +L  +M+ENGC PN+ TYN+I + FL+
Sbjct: 462 FSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLR 521

Query: 183 QNECREAEILLEEMINRGF 239
            NE   A  L +EM++RGF
Sbjct: 522 NNETLRAIQLFQEMLSRGF 540


>ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355495334|gb|AES76537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 496

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/78 (51%), Positives = 57/78 (73%)
 Frame = +3

Query: 3   FDELSSKGLKPDTRTYTVMIRVYCEDGLFGKAKELLTKMEENGCLPNSVTYNVIVQEFLK 182
           F++L  KG   +  TYTVMI V+C +G+FG+A  +L+KMEENGC+PN+VTY +I++    
Sbjct: 417 FEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFD 476

Query: 183 QNECREAEILLEEMINRG 236
           ++E  +AE LL EMI RG
Sbjct: 477 KDENDKAEKLLLEMITRG 494


>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/79 (50%), Positives = 54/79 (68%)
 Frame = +3

Query: 3   FDELSSKGLKPDTRTYTVMIRVYCEDGLFGKAKELLTKMEENGCLPNSVTYNVIVQEFLK 182
           F++L S GL PD RTY VMI  +C +GLF + K +L KME+NGC  N++TYNVI+Q F +
Sbjct: 471 FEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFR 530

Query: 183 QNECREAEILLEEMINRGF 239
            N+  E    ++EM  RGF
Sbjct: 531 SNKISEIVSFMKEMAGRGF 549


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