BLASTX nr result

ID: Atractylodes22_contig00041912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041912
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620319.1| Pentatricopeptide repeat-containing protein ...    81   8e-14
emb|CBI26377.3| unnamed protein product [Vitis vinifera]               79   5e-13
emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]    79   5e-13
gb|ACU33853.1| PPR1 protein [Capsicum annuum]                          76   2e-12
ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containi...    75   4e-12

>ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355495334|gb|AES76537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 496

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/64 (56%), Positives = 50/64 (78%)
 Frame = +3

Query: 6   TYTAMIRVYCEDGLFGKAKALLTKMEENGCLPNSITYNVIIQEFLKQNECREAEILLEEM 185
           TYT MI V+C +G+FG+A A+L+KMEENGC+PN++TY +II+    ++E  +AE LL EM
Sbjct: 431 TYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEM 490

Query: 186 INRG 197
           I RG
Sbjct: 491 ITRG 494


>emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/67 (58%), Positives = 46/67 (68%)
 Frame = +3

Query: 9   YTAMIRVYCEDGLFGKAKALLTKMEENGCLPNSITYNVIIQEFLKQNECREAEILLEEMI 188
           Y  +I   C  G+  +A  LL +MEE GCLP+SIT+NVIIQ  LK+NE  EA  LLEEM 
Sbjct: 464 YNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMR 523

Query: 189 NRGFSPD 209
           NR FSPD
Sbjct: 524 NRNFSPD 530


>emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/67 (58%), Positives = 46/67 (68%)
 Frame = +3

Query: 9    YTAMIRVYCEDGLFGKAKALLTKMEENGCLPNSITYNVIIQEFLKQNECREAEILLEEMI 188
            Y  +I   C  G+  +A  LL +MEE GCLP+SIT+NVIIQ  LK+NE  EA  LLEEM 
Sbjct: 1403 YNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMR 1462

Query: 189  NRGFSPD 209
            NR FSPD
Sbjct: 1463 NRNFSPD 1469


>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/70 (50%), Positives = 47/70 (67%)
 Frame = +3

Query: 3   RTYTAMIRVYCEDGLFGKAKALLTKMEENGCLPNSITYNVIIQEFLKQNECREAEILLEE 182
           RTY  MI  +C +GLF + K +L KME+NGC  N+ITYNVI+Q F + N+  E    ++E
Sbjct: 484 RTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKE 543

Query: 183 MINRGFSPDS 212
           M  RGFS D+
Sbjct: 544 MAGRGFSFDA 553


>ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/65 (55%), Positives = 50/65 (76%)
 Frame = +3

Query: 3   RTYTAMIRVYCEDGLFGKAKALLTKMEENGCLPNSITYNVIIQEFLKQNECREAEILLEE 182
           RTYT MI  +C+ GLF +A ALL+KME+NGC+PN+IT+++II    +++E  +AE LL E
Sbjct: 490 RTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLRE 549

Query: 183 MINRG 197
           MI RG
Sbjct: 550 MIARG 554


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