BLASTX nr result

ID: Atractylodes22_contig00041855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041855
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...    99   5e-19
gb|AAD11595.1| putative reverse transcriptase [Arabidopsis thali...    97   2e-18
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]             95   5e-18
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    94   2e-17
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    92   3e-17

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 41/105 (39%), Positives = 74/105 (70%)
 Frame = -1

Query: 316 WSCAMILALETKNKQGFIDGSTPRPTNDDVLGKQWDRCNYVVLSWILNSVSEELYIGQVF 137
           W   ++++L  KNK GFI G+  +P  +D+L +QW RC+ +VL+W+LNS+S+E+    ++
Sbjct: 62  WKRGVLISLSAKNKLGFITGAYKKPDKEDLLFEQWRRCSDMVLAWLLNSLSKEIAESVLY 121

Query: 136 SKVASVVWQELKETYDKIDGSVMFNLHQKINSLTQSGMSVSEYYH 2
           S+ A  +WQEL++ Y +IDG+ MF L +++N+++Q    V+ Y++
Sbjct: 122 SQTAQELWQELEQRYGQIDGTKMFQLQRELNNVSQGTNDVAAYFN 166


>gb|AAD11595.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|4263040|gb|AAD15309.1| putative reverse transcriptase
           [Arabidopsis thaliana] gi|7270676|emb|CAB77838.1|
           putative reverse transcriptase [Arabidopsis thaliana]
          Length = 374

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 43/104 (41%), Positives = 66/104 (63%)
 Frame = -1

Query: 316 WSCAMILALETKNKQGFIDGSTPRPTNDDVLGKQWDRCNYVVLSWILNSVSEELYIGQVF 137
           W  AM  ++E KNK GF+DGS P+P +DD   K W RCN +V SW+LNSVS+E+Y   ++
Sbjct: 95  WIIAMTTSIEAKNKLGFVDGSIPKPDDDDPYCKIWRRCNSMVKSWLLNSVSKEIYTSILY 154

Query: 136 SKVASVVWQELKETYDKIDGSVMFNLHQKINSLTQSGMSVSEYY 5
              A+ +W++L   + K     ++ L Q+I+SL Q  + +S Y+
Sbjct: 155 FPTAAAIWKDLYTRFHKSSLPRLYKLRQQIHSLRQGNLDLSSYH 198


>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/104 (43%), Positives = 68/104 (65%)
 Frame = -1

Query: 316 WSCAMILALETKNKQGFIDGSTPRPTNDDVLGKQWDRCNYVVLSWILNSVSEELYIGQVF 137
           WS AM +AL  + K GF+ G+  R    D L +QW+ CN +VLSW++N+VSEEL  G V+
Sbjct: 38  WSRAMRIALLGRRKYGFVTGACTRALYKDELHEQWETCNAIVLSWLMNTVSEELLSGIVY 97

Query: 136 SKVASVVWQELKETYDKIDGSVMFNLHQKINSLTQSGMSVSEYY 5
           +  +  VW +LKE +DK++   ++ LH+ I +L+Q   SVS Y+
Sbjct: 98  ATNSCSVWNDLKERFDKVNRVRIYQLHRDITTLSQGTDSVSHYF 141


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/104 (43%), Positives = 66/104 (63%)
 Frame = -1

Query: 316 WSCAMILALETKNKQGFIDGSTPRPTNDDVLGKQWDRCNYVVLSWILNSVSEELYIGQVF 137
           WS AM ++L+ KNK GF+DGS PRP   D   + W RCN +V SW+LNSVS ++Y   + 
Sbjct: 91  WSVAMRISLDAKNKLGFVDGSLPRPLESDPNFRLWSRCNSMVKSWLLNSVSPQIYRSILR 150

Query: 136 SKVASVVWQELKETYDKIDGSVMFNLHQKINSLTQSGMSVSEYY 5
              A+ +W++L + ++  +    +NL Q+I  L Q  MS+SEYY
Sbjct: 151 LNDATDIWRDLFDRFNLTNLPRTYNLTQEIQDLRQGTMSLSEYY 194


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/104 (41%), Positives = 65/104 (62%)
 Frame = -1

Query: 316 WSCAMILALETKNKQGFIDGSTPRPTNDDVLGKQWDRCNYVVLSWILNSVSEELYIGQVF 137
           WS AM+++L+ KNK GFIDG+  RP   D+  + W RCN +V SW+LNSVS ++Y   + 
Sbjct: 87  WSVAMLISLDAKNKTGFIDGTLSRPLESDLNFRLWSRCNSMVKSWLLNSVSPQIYRSILR 146

Query: 136 SKVASVVWQELKETYDKIDGSVMFNLHQKINSLTQSGMSVSEYY 5
              AS +W++L   ++  +    +NL Q+I    Q  +S+SEYY
Sbjct: 147 MNDASDIWRDLNSRFNVTNLPRTYNLTQEIQDFRQGTLSLSEYY 190


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