BLASTX nr result

ID: Atractylodes22_contig00041773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041773
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96033.1|RT12_HELAN RecName: Full=Ribosomal protein S12, mito...   210   2e-52
ref|YP_588353.1| ribosomal protein S12 [Zea mays subsp. mays] gi...   210   2e-52
ref|YP_005090462.1| ribosomal protein S12 (mitochondrion) [Mille...   209   4e-52
ref|NP_064075.2| rps12 gene product (mitochondrion) [Beta vulgar...   209   4e-52
ref|YP_003587241.1| ribosomal protein S12 [Citrullus lanatus] gi...   207   1e-51

>sp|Q96033.1|RT12_HELAN RecName: Full=Ribosomal protein S12, mitochondrial
           gi|1518351|emb|CAA89857.1| ribosomal protein S12
           [Helianthus annuus]
          Length = 125

 Score =  210 bits (535), Expect = 2e-52
 Identities = 102/105 (97%), Positives = 102/105 (97%)
 Frame = -2

Query: 317 QLIRHGREEKRRTDRTRALDQCPQKQGVCLRVPMRTPKKPNSAPRKIAKVRLSNRHDIFA 138
           QLIRHGREEKRRTDRTRALDQCPQKQGVCLRV  RTPKKPNSA RKIAKVRLSNRHDIFA
Sbjct: 6   QLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFA 65

Query: 137 YIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR 3
           YIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR
Sbjct: 66  YIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR 110


>ref|YP_588353.1| ribosomal protein S12 [Zea mays subsp. mays]
           gi|38605685|sp|P60098.1|RT12_WHEAT RecName:
           Full=Ribosomal protein S12, mitochondrial
           gi|38605686|sp|P60099.1|RT12_MAIZE RecName:
           Full=Ribosomal protein S12, mitochondrial
           gi|40795073|gb|AAR91117.1| ribosomal protein S12
           (mitochondrion) [Zea mays]
          Length = 125

 Score =  210 bits (534), Expect = 2e-52
 Identities = 101/105 (96%), Positives = 102/105 (97%)
 Frame = -2

Query: 317 QLIRHGREEKRRTDRTRALDQCPQKQGVCLRVPMRTPKKPNSAPRKIAKVRLSNRHDIFA 138
           QLIRHGREEKRRTDRTRALDQCPQKQGVCLRV  RTPKKPNSA RKIAKVRLSNRHDIFA
Sbjct: 6   QLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFA 65

Query: 137 YIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR 3
           YIPGEGHNLQEHSIVL+RGGRVKDLPGVKFHCIRGVKDLLGIPDR
Sbjct: 66  YIPGEGHNLQEHSIVLVRGGRVKDLPGVKFHCIRGVKDLLGIPDR 110


>ref|YP_005090462.1| ribosomal protein S12 (mitochondrion) [Millettia pinnata]
           gi|372450318|ref|YP_005090500.1| ribosomal protein S12
           (mitochondrion) [Lotus japonicus]
           gi|316996005|dbj|BAD83444.2| ribosomal protein S12
           (mitochondrion) [Nicotiana tabacum]
           gi|357197325|gb|AET62922.1| ribosomal protein S12
           (mitochondrion) [Millettia pinnata]
           gi|357197364|gb|AET62960.1| ribosomal protein S12
           (mitochondrion) [Lotus japonicus]
          Length = 125

 Score =  209 bits (532), Expect = 4e-52
 Identities = 101/105 (96%), Positives = 102/105 (97%)
 Frame = -2

Query: 317 QLIRHGREEKRRTDRTRALDQCPQKQGVCLRVPMRTPKKPNSAPRKIAKVRLSNRHDIFA 138
           QLIRHGREEKRRTDRTRALDQCPQKQGVCLRV  RTPKKPNSA RKIAKVRLSNRHDIFA
Sbjct: 6   QLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFA 65

Query: 137 YIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR 3
           YIPGEGHNLQEHS+VLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR
Sbjct: 66  YIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR 110


>ref|NP_064075.2| rps12 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435095|ref|YP_004222313.1| ribosomal protein S12
           [Beta vulgaris subsp. maritima]
           gi|346683187|ref|YP_004842119.1| ribosomal protein S12
           [Beta macrocarpa] gi|87248036|gb|ABD36073.1| ribosomal
           protein S12 [Beta vulgaris subsp. vulgaris]
           gi|148491434|dbj|BAA99468.2| ribosomal protein S12 [Beta
           vulgaris subsp. vulgaris] gi|317905649|emb|CBJ14048.1|
           ribosomal protein S12 [Beta vulgaris subsp. maritima]
           gi|319439828|emb|CBJ17539.1| ribosomal protein S12 [Beta
           vulgaris subsp. maritima] gi|320148728|emb|CBJ23366.1|
           ribosomal protein S12 [Beta vulgaris subsp. maritima]
           gi|345500105|emb|CBX24923.1| ribosomal protein S12 [Beta
           macrocarpa] gi|384939150|emb|CBL51997.1| ribosomal
           protein S12 (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 125

 Score =  209 bits (532), Expect = 4e-52
 Identities = 101/105 (96%), Positives = 102/105 (97%)
 Frame = -2

Query: 317 QLIRHGREEKRRTDRTRALDQCPQKQGVCLRVPMRTPKKPNSAPRKIAKVRLSNRHDIFA 138
           QLIRHGREEKRRTDRTRALDQCPQKQGVCLRV  RTPKKPNSA RKIAKVRLSNRHDIFA
Sbjct: 6   QLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFA 65

Query: 137 YIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR 3
           YIPGEGHNLQEHS+VLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR
Sbjct: 66  YIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR 110


>ref|YP_003587241.1| ribosomal protein S12 [Citrullus lanatus]
           gi|259156786|gb|ACV96648.1| ribosomal protein S12
           [Citrullus lanatus]
          Length = 123

 Score =  207 bits (527), Expect = 1e-51
 Identities = 100/105 (95%), Positives = 102/105 (97%)
 Frame = -2

Query: 317 QLIRHGREEKRRTDRTRALDQCPQKQGVCLRVPMRTPKKPNSAPRKIAKVRLSNRHDIFA 138
           QLIRHGREEKRRTDRTRALDQCPQKQGVCLRV  RTPKKPNSA RKIAKVRLSNRHDIFA
Sbjct: 6   QLIRHGREEKRRTDRTRALDQCPQKQGVCLRVSTRTPKKPNSALRKIAKVRLSNRHDIFA 65

Query: 137 YIPGEGHNLQEHSIVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR 3
           +IPGEGHNLQEHS+VLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR
Sbjct: 66  HIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDLLGIPDR 110


Top