BLASTX nr result

ID: Atractylodes22_contig00041717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041717
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533103.1| glycine-rich RNA-binding protein, putative [...    60   1e-07
ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ...    60   2e-07
ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...    58   7e-07
gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indi...    57   2e-06
ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group] g...    57   2e-06

>ref|XP_002533103.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223527094|gb|EEF29275.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 78

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/41 (65%), Positives = 36/41 (87%)
 Frame = +3

Query: 3   KSKGYGFVDFVSKDSATKALPEMDGQLLDGRNIRIRYANKK 125
           KS+GYGFV F S+ +A+KAL EM+GQLLDGRNIR+ YA+++
Sbjct: 38  KSEGYGFVKFTSESAASKALKEMNGQLLDGRNIRVCYAHRR 78


>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
           protein product [Vitis vinifera]
          Length = 108

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/40 (72%), Positives = 31/40 (77%)
 Frame = +3

Query: 3   KSKGYGFVDFVSKDSATKALPEMDGQLLDGRNIRIRYANK 122
           KSKGYGFV F S D A  AL EMDGQ LDGRNIR+ YA+K
Sbjct: 68  KSKGYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVTYAHK 107


>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = +3

Query: 3   KSKGYGFVDFVSKDSATKALPEMDGQLLDGRNIRIRYANKK*P 131
           +S+G+GFV+F S DSA+ AL  MDGQ L+GRNIR+ YAN++ P
Sbjct: 79  RSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYANERTP 121


>gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
          Length = 116

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +3

Query: 3   KSKGYGFVDFVSKDSATKALPEMDGQLLDGRNIRIRYAN 119
           KSKGYGFV F S+D A  AL +M G+++DGRNIR+ YAN
Sbjct: 76  KSKGYGFVKFASEDEAAAALHKMGGEVIDGRNIRVHYAN 114


>ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
           gi|215768629|dbj|BAH00858.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222619969|gb|EEE56101.1| hypothetical protein
           OsJ_04953 [Oryza sativa Japonica Group]
           gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa
           Japonica Group]
          Length = 116

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +3

Query: 3   KSKGYGFVDFVSKDSATKALPEMDGQLLDGRNIRIRYAN 119
           KSKGYGFV F S+D A  AL +M G+++DGRNIR+ YAN
Sbjct: 76  KSKGYGFVKFASEDEAAAALHKMGGEVIDGRNIRVHYAN 114


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